The GTPase-accelerating protein (GAP) complex RGS9-1⅐G 5 plays an important role in the kinetics of light responses by accelerating the GTP hydrolysis of G␣ t in vertebrate photoreceptors. Much, but not all, of this complex is tethered to disk membranes by the transmembrane protein R9AP. To determine the effect of the R9AP membrane complex on GAP activity, we purified recombinant R9AP and reconstituted it into lipid vesicles along with the photon receptor rhodopsin. Full-length RGS9-1⅐G 5 bound to R9AP-containing vesicles with high affinity (K d < 10 nM), but constructs lacking the DEP (dishevelled/EGL-10/pleckstrin) domain bound with much lower affinity, and binding of those lacking the entire N-terminal domain (i.e. the dishevelled/EGL-10/pleckstrin domain plus intervening domain) was not detectable. Formation of the membranebound complex with R9AP increased RGS9-1 GAP activity by a factor of 4. Vesicle titrations revealed that on the time scale of phototransduction, the entire reaction sequence from GTP uptake to GAP-catalyzed hydrolysis is a membrane-delimited process, and exchange of G␣ t between membrane surfaces is much slower than hydrolysis. Because in rod cells different pools exist of RGS9-1⅐G 5 that are either associated with R9AP or not, regulation of the association between R9AP and RGS9-1⅐G 5 represents a potential mechanism for the regulation of recovery kinetics.Timely deactivation of G protein ␣ subunits is a key element of responses to the stimulation of G protein-coupled receptors. It plays an especially important role in fast cellular responses such as those of vertebrate photoreceptors. In the rod and cone cell outer segments, the recovery phase of light responses depends on the presence of a GTPase-accelerating protein (GAP) 1 complex RGS9-1⅐G 5 (1-4). Whether and how the GAP activity of this complex is regulated is unknown.RGS9-1 contains multiple functional domains, including an RGS domain that is responsible for its GAP activity (3), a G protein ␥ subunit-like domain for G 5L binding (4,5), an Nterminal domain that includes a DEP (dishevelled/EGL-10/ pleckstrin) domain (6) and an intermediate domain (7), and a C-terminal domain that is unique to RGS9-1 among all of the RGS proteins (8). All of these domains have been found to participate in the regulation of GAP activity and substrate specificity (9 -11). The inhibitory PDE␥ subunit of the effector regulated by G␣ t , cGMP phosphodiesterase (PDE6), interacts with both G␣ t and the catalytic core of RGS9-1 and enhances RGS9-1 GAP activity (12-14) in vitro, but it is not clear how this enhancement is accomplished in a physiological setting in which tight PDE␥ binding to PDE6 catalytic subunits blocks GAP enhancement (15-18).Additional possible mechanisms for regulation include a light-and calcium-regulated phosphorylation (19, 20) of RGS9-1 and interactions with the recently discovered membrane anchor protein, R9AP (7, 21). R9AP is a 25-kDa protein that is selectively expressed in photoreceptor outer segments. Homologues are apparen...