We have examined the tissue-specific expression and inducibility of acyl-CoA oxidase and cytochrome P4501VA1 (P45OIVAl) RNA in rats. Groups of three rats were dosed daily by gavage with methylclofenapate at 25 mg/kg in 5 ml/kg corn oil for nine weeks, or were administered a vehicle control. P45OIVAl and acyl-CoA oxidase RNA were detected using an RNase protection assay. Similar levels of acyl-CoA oxidase RNA were present in control liver and kidney, but the level of this RNA in lung, muscle and testis was 6 -11%, and in pancreas was 0.13%, of that in liver. Treatment of rats with methylclofenapate led to an 11-fold induction of acyl-CoA oxidase RNA in liver and also produced a significant induction of this RNA in kidney, lung, muscle and testis of 1.7-fold, 1.3-fold, 2-fold and 1.7-fold, respectively. Acyl-CoA oxidase RNA was not induced in pancreas.P45OIVA1 RNA was present in control liver and also in kidney of control rats at 28% of the level in liver. In contrast to acyl-CoA oxidase RNA, P45OIVAl RNA was not detected in lung, pancreas or testis. Methylclofenapate treatment of rats led to an 18-fold induction of P45OIVA1 RNA in liver, and a sevenfold induction in kidney. Induction of P45OIVA1 was not detected in any of the other tissues examined. Quantification of the relative amounts of acyl-CoA oxidase and P45OIVAl RNA in control liver revealed that acyl-CoA oxidase RNA was present in a 17.5-fold molar excess over P45OIVA1 RNA.Western blotting with an antbP450IVA IgG revealed two bands of similar apparent molecular mass in liver and kidney microsomes, but not in microsomes from the testis of control rats. Methylclofenapate treatment of rats caused an increase in the intensity of these bands in microsomes from liver, but no induction was obvious in kidney. Immunocytochemical staining for both the microsomal P45OIVA and peroxisomal acyl-CoA oxidase proteins was restricted to the proximal convoluted tubule in the kidney cortex, with staining being most intense in the S3 region.The peroxisome proliferators were originally defined as a structurally diverse class of chemicals which induce proliferation of endoplasmic reticulum and peroxisomes, hyperpkdsia, hepatomegaly and carcinogenesis in rodent liver [l]. The mechanism whereby these changes occur is currently unclear, although two hypotheses are currently under investigation, as reviewed in [2]. The absence of a concrete mechanistic relationship between early events, such as hyperplasial peroxisome proliferation, and the late hepatocarcinogenic lesion, has focussed attention on the examination of the early events in the liver [2].Treatment with peroxisome proliferators leads to induction of a cytochrome P-450 which catalyses the o-hydroxylation of fatty acids [3 -51. This enzyme was purified [6] and cloned [7] from the rat and designated cytochrome P45OIVA1 [8], the first member of the complex P450IV gene family (e.g.