2022
DOI: 10.3389/fcell.2022.775512
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Transcriptome Profiling of Osteoblasts in a Medaka (Oryzias latipes) Osteoporosis Model Identifies Mmp13b as Crucial for Osteoclast Activation

Abstract: Matrix metalloproteases (MMPs) play crucial roles in extracellular matrix (ECM) modulation during osteoclast-driven bone remodeling. In the present study, we used transcriptome profiling of bone cells in a medaka model for osteoporosis and bone regeneration to identify factors critical for bone remodeling and homeostasis. This identified mmp13b, which was strongly expressed in osteoblast progenitors and upregulated under osteoporotic conditions and during regeneration of bony fin rays. To characterize the role… Show more

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Cited by 3 publications
(3 citation statements)
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References 66 publications
(101 reference statements)
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“…RNA sequencing and bioinformatics analysis were performed by Novogene (Singapore) and as described previously. 84 GO term and KEGG pathway analyses were performed on differentially expressed genes identified with a threshold of p<0.05, using g:Profiler (version e109_eg56_p17_1d3191d) with g:SCS multiple testing correction method applying a significance threshold of 0.05. 85 Blinding was not performed.…”
Section: Methodsmentioning
confidence: 99%
“…RNA sequencing and bioinformatics analysis were performed by Novogene (Singapore) and as described previously. 84 GO term and KEGG pathway analyses were performed on differentially expressed genes identified with a threshold of p<0.05, using g:Profiler (version e109_eg56_p17_1d3191d) with g:SCS multiple testing correction method applying a significance threshold of 0.05. 85 Blinding was not performed.…”
Section: Methodsmentioning
confidence: 99%
“…(126) To date, there is a vast library of transgenic reporter and mutant zebrafish available that has been shown to accurately model various skeletal diseases (Zebrafish Information Network [ZFIN]; www.zfin.org), allowing bone cell populations to be imaged, FACS isolated, or manipulated. (124,127,128) Zebrafish can also model high BMD (84,(129)(130)(131) ; eg, an osteopetrosis-like phenotype in mmp9 À/À ;mmp13b À/À double mutant fish, (78) CSF1R-related dysosteosclerosis (OMIM 618476), (132,133) and PTDSS1-related Lenz-Majewski hyperostotic dysplasia (OMIM 151050). (134) Exploiting the zebrafish lifespan to understand spatiotemporal and molecular causes of HBM Initial zebrafish development is rapid with the first skeletal progenitor cells in the form of neural crest cells appear around the first day of development.…”
Section: D Modeling Of Bone Tissue In Vitromentioning
confidence: 99%
“…( 126 ) To date, there is a vast library of transgenic reporter and mutant zebrafish available that has been shown to accurately model various skeletal diseases (Zebrafish Information Network [ZFIN]; www.zfin.org ), allowing bone cell populations to be imaged, FACS isolated, or manipulated. ( 124 , 127 , 128 ) Zebrafish can also model high BMD ( 84 , 129 , 130 , 131 ) ; eg, an osteopetrosis‐like phenotype in mmp9 −/− ; mmp13b −/− double mutant fish, ( 78 ) CSF1R ‐related dysosteosclerosis (OMIM 618476), ( 132 , 133 ) and PTDSS1 ‐related Lenz–Majewski hyperostotic dysplasia (OMIM 151050). ( 134 )…”
Section: Understanding Hbm Mechanisms Through Functional Genomicsmentioning
confidence: 99%