2004
DOI: 10.1128/mcb.24.14.6117-6126.2004
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Transcription Regulatory Complexes Bind the Human T-Cell Leukemia Virus 5′ and 3′ Long Terminal Repeats To Control Gene Expression

Abstract: The human T-cell leukemia virus type 1 (HTLV-1) is a retrovirus that integrates randomly into the T-cell genome. Two long terminal repeats (LTRs) flank the integrated provirus. The upstream and downstream LTRs carry identical promoter sequences. Studies with other retroviruses suggest that the downstream promoter is silent and that RNA polymerases initiating at the upstream promoter proceed through the 3 LTR. In this study, we used the chromatin immunoprecipitation assay to compare the binding of transcription… Show more

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Cited by 58 publications
(70 citation statements)
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References 52 publications
(47 reference statements)
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“…ChIP Assays, Real-time PCR, and Primers-ChIP assays, real-time PCR, and data analysis were performed as previously described (23,29). PCR primers were as follows: HTLV-1 promoter (Ϫ349/Ϫ81), 5Ј-AA-TGACCATGAGCCCCA/GTGAGGGGTTGTCGTCA-3Ј; luciferase proximal (ϩ708/ϩ804), 5Ј-ATTTATCGGAGTTGCAGTTGCGCC/ AACAAACACTACGGTAGGCTGCGA-3Ј; luciferase distal (ϩ1527/ ϩ1717), 5Ј-TGAAGCGAAGGTTGTGGATCTGGA/AGAAGTGTT-CGTCTTCGTCCCAGT-3Ј; luciferase Region 2 (ϩ799/ϩ1041), 5Ј-C-GCAGTATCCGGAATGATTTGATTGCCA/ACGGATTACCAGG-GATTTCAGTCG-3Ј; pGL3 vector 5Ј (Region 1), 5Ј-GATCGGTGCG-GGCCTCTTCGCTATTA/TCGATAGAGAAATGTTCTGGCACC-TGCACT-3Ј; pGL3 vector 3Ј (Region 3), 5Ј-GGG AGGTGTGGGAG-GTTT/ACCGTATTACCGCCTTTGAGTGAG-3Ј; ␤-globin promoter, 5Ј-TCACACACTTGACCCTGTGCCATA/TTATATGCCCTGT-CCTGGCTCCTT-3Ј.…”
Section: Methodsmentioning
confidence: 99%
See 3 more Smart Citations
“…ChIP Assays, Real-time PCR, and Primers-ChIP assays, real-time PCR, and data analysis were performed as previously described (23,29). PCR primers were as follows: HTLV-1 promoter (Ϫ349/Ϫ81), 5Ј-AA-TGACCATGAGCCCCA/GTGAGGGGTTGTCGTCA-3Ј; luciferase proximal (ϩ708/ϩ804), 5Ј-ATTTATCGGAGTTGCAGTTGCGCC/ AACAAACACTACGGTAGGCTGCGA-3Ј; luciferase distal (ϩ1527/ ϩ1717), 5Ј-TGAAGCGAAGGTTGTGGATCTGGA/AGAAGTGTT-CGTCTTCGTCCCAGT-3Ј; luciferase Region 2 (ϩ799/ϩ1041), 5Ј-C-GCAGTATCCGGAATGATTTGATTGCCA/ACGGATTACCAGG-GATTTCAGTCG-3Ј; pGL3 vector 5Ј (Region 1), 5Ј-GATCGGTGCG-GGCCTCTTCGCTATTA/TCGATAGAGAAATGTTCTGGCACC-TGCACT-3Ј; pGL3 vector 3Ј (Region 3), 5Ј-GGG AGGTGTGGGAG-GTTT/ACCGTATTACCGCCTTTGAGTGAG-3Ј; ␤-globin promoter, 5Ј-TCACACACTTGACCCTGTGCCATA/TTATATGCCCTGT-CCTGGCTCCTT-3Ј.…”
Section: Methodsmentioning
confidence: 99%
“…In previous studies we have examined transcription factor binding and histone modifications at the viral promoter in Tax-expressing, HTLV-1-infected cells (23,29). In this study, we sought to better define the epigenetic changes that occur during Tax-dependent activation of HTLV-1 LTR-directed transcription in vivo.…”
Section: Human T-cell Leukemia Virus Type 1 (Htlv-1)mentioning
confidence: 99%
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“…Indeed, HDAC complexes differ between the 5Ј-and 3Ј-HTLV-1 promoters, with HDAC1 and HDAC2 binding preferentially at the 5Ј-LTR and HDAC3 binding at the 3Ј-LTR. 38 VPA, in addition to the weakly inhibiting catalytic activity of class I HDAC 39 induces proteasomal degradation of HDAC2, unlike other inhibitors, eg, trichostatin A. 40 VPA preferentially releases HDAC2-dependent transcriptional repression and therefore might favor Tax binding at the 5Ј-LTR and sense-strand transcription.…”
mentioning
confidence: 99%