“…Colocalization techniques offer the possibility of organelle identification, and such studies usually use one or more of the following approaches: (i) a pulse-chase experiment using exogenously applied marker substrates, e.g., Transferrin-Texas Red (to mark EE), fluorescein isothiocyanate (FITC)-dextran (to mark LYS) etc., (ii) cells transfected with green fluorescence protein (GFP)-labeled organelle marker proteins, or (iii) following cell fixation use of labeled antibodies against the organelle marker proteins (Table ). Protocols for, and the pros and cons of, fluorescence microscopy techniques are discussed at length elsewhere. ,,, Briefly, the main issues are as follows: these are single cell assays (are the results typical of the whole population? ); lack of quantitation; difficulty in obtaining a temporal dissection of the trafficking pathway; and, where fixation is used, the potential for fixation artifacts.…”