The Tres Arroyos granite-pegmatite system is located in the SW margin of the Nisa-Alburquerque Variscan batholith. Two granitic facies (monzogranite and marginal leucogranite), and three types of aplite-pegmatite dykes (barren, intermediate and highly evolved Li-rich), have been distinguished in the area, with a zoned distribution from the granite southwards. Trace elements in quartz from the five facies have been analyzed by LA-ICP-MS in order to obtain information about the petrogenetic links among the different lithologies of this system, as well as to better understand the regional and individual fractionation processes that led to the distinct rocks. Aluminium, Ti, Li and Ge show continuous trends from the monzogranite, through the marginal granitic facies, the barren and intermediate aplite-pegmatites, up to the most evolved Li-rich dykes.