2019
DOI: 10.1038/s41557-019-0319-5
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Towards the online computer-aided design of catalytic pockets

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Cited by 874 publications
(812 citation statements)
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References 60 publications
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“…Single-crystal X-ray diffraction structure analysis reveals that the square-planar Pd1 is highly symmetrical, rigid, and sterically encumbered, as reflected by a buried volume V Bur of 45 % ( Figure 2, right: a and b). [26] Notably, this V Bur % is less than the value (49 %) of DBB-iPr-Pd reported by Gao (Supporting Information), [24] but the DBB backbone also efficiently inhibits the rotation of axial Ipty substituents ( Figure 2, right: c). As a result, the crucial Pd-Me group is buried by the axial Ipty substituents because it is placed at the center of two wedges ( Figure 2, right: d).…”
mentioning
confidence: 64%
“…Single-crystal X-ray diffraction structure analysis reveals that the square-planar Pd1 is highly symmetrical, rigid, and sterically encumbered, as reflected by a buried volume V Bur of 45 % ( Figure 2, right: a and b). [26] Notably, this V Bur % is less than the value (49 %) of DBB-iPr-Pd reported by Gao (Supporting Information), [24] but the DBB backbone also efficiently inhibits the rotation of axial Ipty substituents ( Figure 2, right: c). As a result, the crucial Pd-Me group is buried by the axial Ipty substituents because it is placed at the center of two wedges ( Figure 2, right: d).…”
mentioning
confidence: 64%
“…The dirhodium heterocyclic carbene 3 is by any standards sterically encumbered, taking up 63.8 % buried volume in the complex 4 (Figure ), which far exceeds that of most conventional NHC ligands . This presumably contributes to the remarkable thermal and aerobic stability of the shielded carbene donor.…”
Section: Methodsmentioning
confidence: 99%
“… Alternative representations of the steric profile of 3 . a) Steric map . b) Space‐filling with μ‐carbido shown as black.…”
Section: Methodsmentioning
confidence: 99%
“…Finally, to unveil the different behavior of the ruthenium catalysts bearing iodides or chlorides, the steric properties were studied by calculating the buried volume (% V Bur ) by means of the SambVca2.1 package developed by Cavallo and co-workers. [17] This computational tool was used here to describe the crowding of the metal center when the more sterically demanding iodides are included, putting the eye on a plane placed 2 away from the plane that holds the metal and both halide atoms, to better describe the interaction between the metal center and the entering olefin. In particular, quantitative comparison of the catalytic trans species with or without the Ru À S bond confirmed that iodides impose a % V Bur increase of 3.4 and 4.3 %, respectively ( Figure 6 and the Supporting Information).…”
Section: Angewandte Chemiementioning
confidence: 99%