In a recent paper [Phys. Rev. A 77, 064702 (2008)], Bruhns et al. reported on an experimental investigation of charge transfer in collisions of Si 3+ ions with atomic hydrogen and compared the energy dependence of the transfer cross sections with published theoretical results and with earlier experimental results for other effectively-one-electron isocharged ions, including C 3+ and O 3+ . These authors observe that these three ions all have the structure of a single electron outside a closed subshell and thus might be expected to behave similarly. However, their results show quite different behavior, and they conclude that the influence of quantum-mechanical effects from the ionic core is clearly seen. We have investigated theoretically three collision systems, Si 3+ , C 3+ , and O 3+ with atomic hydrogen, at projectile energies up to 10 keV/amu using the method of electron nuclear dynamics (END). In this paper we want to clarify and describe in some detail these quantum-mechanical effects by showing the time-dependent dynamics of the electrons during the collision of these three ions with atomic hydrogen. Total charge transfer cross sections were calculated for all three ions and compared with other theoretical and experimental results, showing good overall agreement. With this validation of the END description of the processes, we analyze the details of the computed dynamics of the electrons in each of the processes and illustrate the different mechanisms underlying observed differences in reaction outcomes.