TOMCAT: A MATLAB toolbox for multivariate calibration techniques

Daszykowski, M.; Serneels, Sven; Kaczmarek, Krzysztof; Espen, P. Van; Croux, Christophe; Walczak, Beata

doi:10.1016/j.chemolab.2006.03.006

Cited by 182 publications

(91 citation statements)

References 23 publications

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“…em que: Y p -Variável dependente a ser predita ɛ -Vetor de resíduos Utilizou-se da estatística de z-score robusto (Daszykowski et al, 2007) para identificar medidas anômalas (outliers) com base em resíduos entre valores medidos e preditos, obtidos com o uso da regressão PLS em todo o conjunto de dados (Eq. 5).…”

Section: Methodsunclassified

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Estimativa de severidade do mofo-branco em lavouras de feijão utilizando-se sensores hiper e multiespectral

Machado

Pinto

Queiroz

et al. 2015

Rev. bras. eng. agríc. ambient.

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R E S U M ONeste estudo objetivou-se identificar comprimentos de onda e faixas espectrais provenientes de reflectâncias hiper e multiespectrais utilizando regressão PLS e promover avaliação comparativa desses métodos e de dez índices de vegetação, para determinar aqueles que melhor estimam níveis de severidade de mofo-branco em feijão. Foram implantados experimentos nos municípios de Viçosa e de Oratórios, estado de Minas Gerais. Reflectâncias hiperespectrais foram obtidas com espectroradiômetro cuja faixa útil de leitura adotada foi entre 440 e 900 nm. Reflectâncias multiespectrais foram obtidas de imagens de câmara constituídas de cinco bandas (vermelho, verde, azul, Red-edge e infravermelho). Os índices de severidade da doença foram baixos; em Viçosa a média foi de 5,8% e em Oratórios, 7,4%. Modelos matemáticos utilizando reflectâncias hiperespectrais tiveram melhor desempenho para estimar mofo-branco; a banda do red-edge apresentou os comprimentos de onda que melhor estimam a severidade do mofo-branco. Índices de vegetação resistentes a efeitos da reflectância de solo estimaram melhor o mofo-branco do que os demais índices.Estimative of white mold severity in common bean crops using hyper and multispectral sensors A B S T R A C TThis study aimed to identify wavelengths and spectral ranges from hyper and multispectral reflectance using PLS regression; and to promote comparative evaluation of these methods and ten vegetation indices to determine those that best estimate levels of white mold severity in common beans. Experiments were implemented in the municipalities of Viçosa and Oratorios, Minas Gerais state. Hyperspectral reflectance measurements were acquired with the spectroradiometer, whose useful reading range was between 440 and 900 nm. Multispectral reflectance measurements were obtained from camera images comprising five bands (red, green, blue, red-edge and infrared). The indexes of disease severity were low. In Viçosa the average was 5.8% and in Oratorios, 7.4%. Mathematical models using hyperspectral reflectance performed better for estimating white mold. The red-edge band presented the wavelengths that best estimate the severity of white mold. Vegetation index resistant to the soil reflectance effects was better to estimate white mold than the other indices. Palavras-chave:regressão PLS índice de vegetação agricultura de precisão

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Section: Methodsunclassified

“…Para a regressão PLS, utilizou-se o pacote OPS Toolbox para Matlab (Teófilo et al, 2009). O desvio s Qn foi obtido pelo Toolbox Matlab TOMCAT (Daszykowski et al, 2007).…”

Section: Methodsunclassified

Estimativa de severidade do mofo-branco em lavouras de feijão utilizando-se sensores hiper e multiespectral

Machado

Pinto

Queiroz

et al. 2015

Rev. bras. eng. agríc. ambient.

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“…The accuracy of the models was evaluated using RMSECV. All PLSR analyses were carried out using the TOMCAT toolbox 1.01 within MATLAB (Daszykowski et al 2007). …”

Section: Partial Least Squares Regressionmentioning

confidence: 99%

Leaf Area Index Retrieved From Thermal Hyperspectral Data

Neinavaz¹,

Skidmore²,

Darvishzadeh³

et al. 2016

Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci.

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ABSTRACT:Leaf area index (LAI) is an important essential biodiversity variable due to its role in many terrestrial ecosystem processes such as evapotranspiration, energy balance, and gas exchanges as well as plant growth potential. A novel approach presented here is the retrieval of LAI using thermal infrared (8-14 μm, TIR) measurements. Here, we evaluate LAI retrieval using TIR hyperspectral data. Canopy emissivity spectral measurements were recorded under controlled laboratory conditions using a MIDAC (M4401-F) illuminator Fourier Transform Infrared spectrometer for two plant species during which LAI was destructively measured. The accuracy of retrieval for LAI was then assessed using partial least square regression (PLSR) and narrow band index calculated in the form of normalized difference index from all possible combinations of wavebands. The obtained accuracy from the PLSR for LAI retrieval was relatively higher than narrow-band vegetation index (0.54

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“…Moreover, iterative methods often require the assistance of an expert. Two methods, PLS and RBF-PLS (Radial Basis Functions PLS) [43,44], were used to build the chemometric model. Modelling was performed for methane and carbon monoxide.…”

Section: Gas Content Determination Based On a Measured Spectrummentioning

confidence: 99%

Influence of temperature on synthetic data-based calibration models for low resolution open-path FTIR spectroscopy

Cięszczyk¹

2014

Bulletin of the Polish Academy of Sciences: Technical Sciences

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Abstract. This article presents the problem of determining the gas concentration under conditions of changing temperatures. The solution to this problem is based on spectral measurements using chemometric models. Such problems arise when measuring gases during various industrial processes, mainly the pyrolysis process. Chemometric models are built using synthetic calibration data. Line-by-line and statistical models were applied for spectra modelling. The effect of temperature on extracting the gas concentration from spectra of various resolutions was determined. Next, the global model was built and tested using calibration data for specific temperature ranges. The properties of the linear and nonlinear partial least-squares (PLS) models that were applied to the considered issues were demonstrated. CO and CH4 were used as example gases.

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TOMCAT: A MATLAB toolbox for multivariate calibration techniques

Cited by 182 publications

References 23 publications

Estimativa de severidade do mofo-branco em lavouras de feijão utilizando-se sensores hiper e multiespectral

Estimativa de severidade do mofo-branco em lavouras de feijão utilizando-se sensores hiper e multiespectral

Leaf Area Index Retrieved From Thermal Hyperspectral Data

Influence of temperature on synthetic data-based calibration models for low resolution open-path FTIR spectroscopy

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