Time-varying effects of FOXA1 on breast cancer prognosis

Chen, Qian-Xin; Yang, Yuan-Zhong; Liang, Zhuo-Zhi; Chen, Jiali; Li, Yuelin; Huang, Ziyi; Weng, Zijin; Zhang, Xiaofang; Guan, Jingyan; Tang, Lu-Ying; Yun, Jing‐Ping; Ren, Ze-Fang

doi:10.1007/s10549-021-06125-7

Cited by 7 publications

(2 citation statements)

References 34 publications

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“…TMA construction and IHC staining were carried out according to standard procedure, the details of which we have previously described. 25 Briefly, tissue cylinders with a diameter of 1 mm were punched out of the corresponding paraffin block as donor block and placed into the TMA paraffin block. After dewaxing, hydration, and antigen retrieval (Target Retrieval; Dako pH 6.0), slides were incubated in rabbit monoclonal (EPR 19758) to ENO1 (ab 227978, diluted 1:3000, Abcam) and labeled with the EnVision Detection System (Peroxidase/Diaminobenzidine, Rabbit/Mouse) (Dako K5007).…”

Section: Methodsmentioning

confidence: 99%

Association of Enolase-1 with Prognosis and Immune Infiltration in Breast Cancer by Clinical Stage

Shi¹,

Chen²,

Chen³

et al. 2023

JIR

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Purpose Enolase-1 (ENO1) plays a key role in malignancies. Previous studies on the association between ENO1 expression and breast cancer prognosis had yielded inconsistent results. In the present study, we assessed the prognostic effect of ENO1 in breast cancer using Guangzhou Breast Cancer Study (GZBCS) cohort with full consideration of the potential confounders and the modification effects. The results were further validated in the TCGA-BRCA cohort and explained by tumor immunity. Methods ENO1 protein expressions were evaluated by immunohistochemistry in tissue microarrays from 961 patients with primary invasive breast cancer. Chi-square tests were used to assess the association of ENO1 levels with the patient’s characteristics. Cox regression models were applied to assess the prognostic effects. The TCGA-BRCA cohort was utilized to validate the results and explore the potential mechanisms. The immune infiltration was determined using the CIBERSORT and ssGSEA algorithms; the correlation between ENO1 expression and the abundance of tumor-infiltrating immune cells (TIICs) and scores of immune-related functions was evaluated by Wilcoxon signed-rank tests and Spearman’s rank test. Results ENO1 protein expression exerted a protective effect on OS in stage I/II patients (HR=0.58, 95% CI: 0.35–0.96) but not in stage III patients (HR=1.42, 95% CI: 0.81–2.49, P interaction =0.04) in GZBCS; consistent results were obtained at mRNA levels in TCGA cohort. Immune infiltration analyses revealed that ENO1 was positively correlated with multiple antitumor TIICs (including M1 macrophages, B cells, CD8 T cells, T helper 2 cells, and NK cells) only in stage I/II but not stage III patients. Conclusion A higher expression of ENO1 was associated with a better prognosis only in early-stage breast cancer, which may be related to the different effects of ENO1 on immune infiltration, suggesting that ENO1 may be a promising target for precision immunotherapy in breast cancer.

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Section: Methodsmentioning

confidence: 99%

Association of Enolase-1 with Prognosis and Immune Infiltration in Breast Cancer by Clinical Stage

Shi¹,

Chen²,

Chen³

et al. 2023

JIR

Self Cite

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“…The level of H3K9me3 was evaluated with tissue microarrays (TMAs) by immunohistochemistry (IHC). TMAs were constructed as previously described [ 36 ]. The TMAs were baked at 60 °C for 2 h and then dewaxed with xylene and ethanol.…”

Section: Methodsmentioning

confidence: 99%

Association of H3K9me3 with breast cancer prognosis by estrogen receptor status

et al. 2022

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Background Cellular experiments revealed that a decreased histone H3 lysine 9 trimethylation (H3K9me3) level was associated with the upregulation of oncogenes in breast cancer cells. Moreover, the role of H3K9me3 in breast cancer was closely associated with estrogen receptor (ER) status. Therefore, we aimed to examine the prognostic value of H3K9me3 on breast cancer by ER status. The level of H3K9me3 in tumors were evaluated with tissue microarrays by immunohistochemistry for 917 women diagnosed with primary invasive breast cancer. Hazard ratios (HRs) and their 95% confidence intervals (CIs) for overall survival (OS) and progression-free survival (PFS) were estimated using Cox regression models. Interaction between H3K9me3 and ER on the prognosis was assessed on multiplicative scale. Results The level of H3K9me3 in tumor tissues was lower than that in adjacent tissues. The high level of H3K9me3 was associated with a better OS (HR = 0.43, 95% CI: 0.21–0.86) and PFS (HR = 0.49, 95% CI: 0.29–0.81) among only ER-positive but not ER-negative tumors. Moreover, the interaction between the level of H3K9me3 and ER status (negative and positive) on the prognosis was significant (Pinteraction = 0.011 for OS; Pinteraction = 0.022 for PFS). Furthermore, the ER-positive tumors were stratified by ER-low and ER-high positive tumors, and the prognostic role of H3K9me3 was significant among only ER-high positive patients (HR = 0.34, 95% CI: 0.13–0.85 for OS; HR = 0.47, 95% CI: 0.26–0.86 for PFS). Conclusions Our study showed that the prognostic value of H3K9me3 on breast cancer was related to ER status and expression level, and the high level of H3K9me3 was associated with a better prognosis among ER-positive tumors, particularly ER-high positive tumors.

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