Translocation of preproteins with N-terminal presequences into mitochondria requires the cooperation of the translocase of the outer membrane (TOM complex) and the presequence translocase of the inner membrane (TIM23 complex). However, the molecular nature of the translocation contact sites is poorly understood. We have identified a novel component of the TIM23 translocase, Tim21, which is involved in their formation. Tim21 is anchored in the mitochondrial inner membrane by a single transmembrane domain and exposes its C-terminal domain into the intermembrane space. The purified C-terminal domain of Tim21 appears not to bind to any of the TIM23 components but rather specifically interacts with the TOM complex. We propose that Tim21 binds to the trans site of the TOM complex thus keeping the two translocases in close contact.Import of preproteins with matrix-targeting signals (presequences) from the cytosol into mitochondria requires the concerted action of the translocase of the outer membrane (TOM 1 complex) and the preprotein translocase of the inner membrane (TIM23 complex) (for reviews on protein import into mitochondria, see Refs. 1-4). In the presence of an arrested translocation intermediate the TOM and the TIM23 complexes could be co-isolated (5, 6). However, a direct interaction between components of the TOM and the TIM23 complexes has not been observed so far. The TOM complex consists of receptor subunits and the general insertion pore made up from the central poreforming component Tom40, the receptor Tom22, and small Tom subunits. Following transport of presequences across the outer membrane via the pore of the TOM complex the preproteins are bound at the trans site of the TOM complex. The molecular nature of the trans site is not exactly clear, but segments of Tom40, the IMS domain of Tom22, and Tom7 were reported to be involved in binding of preproteins at the trans side of the membrane (7-10). The preproteins are then transferred to the TIM23 complex, which can be divided into a tightly membraneintegrated part with hydrophilic domains in the intermembrane space and the import motor. Two components of the membrane-integrated part, Tim23 and Tim17, are believed to form the preprotein-conducting channel (5,11,12), whereas Tim50 appears to exert its function in the transfer of preproteins from the TOM to the TIM23 translocase (13)(14)(15). The N-terminal hydrophilic domain of Tim23 has a role in tethering the inner membrane translocase to the outer membrane bringing both membranes in close contact (16). This appears to facilitate the preprotein transfer between the translocases and to thereby increase the efficiency of protein import.The import motor, made up from five known proteins, Tim14, Tim16, Tim44, Mge1, and mtHsp70, is attached to the membrane part at the matrix face of the inner membrane. It completes translocation of the preprotein across the inner membrane by ATP-driven cycles of binding to and releasing from mtHsp70, leading to the vectorial movement into the matrix.We report here the ident...