Three cyanobacterial strains originating from different habitats were subjected to temperature shift exposures and monitored for levels of proline, thiol and activity of glyceraldehyde-3-phosphate dehydrogenase (GAPDH). Thermophile Mastigocladus laminosus (growth optimum, 40°C), raised the proline level 4.2-fold at low temperature (20°C), for the psychrophile Nostoc 593 (growth optimum, 20°C), it was raised 8-fold at 40°C while in the mesophile Nostoc muscorum (growth optimum, 30°C), the imino acid level increased 2.3-fold during temperature 'shiftdown' to 20°C or 3.5-fold in sets facing 'shiftup' (40°C). Alterations in thiol levels in the above strains were in line with proline. It is suggested that such fluctuations reflect metabolic shifts as a response to stress. Interestingly, GAPDH activity was maximum at the respective growth temperature optimum of M. laminosus (122 nmol NADPH oxidized min )1 mg )1 protein) and Nostoc 593 (141 nmol NADPH oxidized min )1 mg )1 protein) while in N. muscorum, it increased at 40°C (101 nmol NADPH oxidized min )1 mg )1 protein) and to 93.3 nmol NADPH oxidized min )1 mg )1 protein (20°C) relative to 86 nmol NADPH oxidized min )1 mg )1 protein at 30°C. It seems that extremophiles maintain the GAPDH activity/level during growth at their respective temperatures optimal while the mesophile increases it in order to cope up with temperature-stress.