Graded acid hydrolysis of partially O-acetylated, partially desulfated, completely carboxyl-reduced, and Nacetylated heparin, under optimal yield conditions, afforded two crystalline amino sugar-containing disaccharides, isolated from the hydrolysate by preparative paper chromatographic techniques. The unit sequence in each disaccharide was proved by hydrolysis of the corresponding alditols, with isolation of the fragments. Evidence for the linkage positions and configuration was provided by color reactions, electrophoretic data, and infrared spectral and molecular rotatory data on the disaccharides, their iV-acetyl and alditol derivatives. Methylation analysis, with isolation of crystalline partially methylated hydrolytic fragments, provided unequivocal confirmatory proof for formulation of the disaccharides, as 0-a-D-glucopyranosyl-( 1 -4)-2-amino-2-deoxy-a-oglucopyranose hydrochloride (I) and 0-2-amino-2-deoxy-a-D-glucopyranosyl-(l -* 4)-a-n-glucopyranose hydrochloride (II). Juxtaposition of the structures of the two disaccharides demonstrates heparin to possess an a-o-(1 -* 4)-linked backbone structure of 2-amino-2-deoxy-D-glucose and n-glucuronic acid units, very probably in an alternating sequence.