A novel thermostable Mn(II)-dependent 2,3-dihydroxybiphenyl-1,2-dioxygenase (BphC_JF8) catalyzing the metacleavage of the hydroxylated biphenyl ring was purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8, and the gene was cloned. The native and recombinant BphC enzyme was purified to homogeneity. The enzyme has a molecular mass of 125 ؎ 10 kDa and was composed of four identical subunits (35 kDa). BphC_JF8 has a temperature optimum of 85°C and a pH optimum of 7.5. It exhibited a half-life of 30 min at 80°C and 81 min at 75°C, making it the most thermostable extradiol dioxygenase studied. Inductively coupled plasma mass spectrometry analysis confirmed the presence of 4.0-4.8 manganese atoms per enzyme molecule. The EPR spectrum of BphC_JF8 exhibited g ؍ 2.02 and g ؍ 4.06 signals having the 6-fold hyperfine splitting characteristic of Mn(II). The enzyme can oxidize a wide range of substrates, and the substrate preference was in the order 2,3-dihydroxybiphenyl > 3-methylcatechol > catechol > 4-methylcatechol > 4-chlorocatechol. The enzyme is resistant to denaturation by various chelators and inhibitors (EDTA, 1,10-phenanthroline, H 2 O 2 , 3-chlorocatechol) and did not exhibit substrate inhibition even at 3 mM 2,3-dihydroxybiphenyl. A decrease in K m accompanied an increase in temperature, and the K m value of 0.095 M for 2,3-dihydroxybiphenyl (at 60°C) is among the lowest reported. The kinetic properties and thermal stability of the native and recombinant enzyme were identical. The primary structure of BphC_JF8 exhibits less than 25% sequence identity to other 2,3-dihydroxybiphenyl 1,2-dioxygenases. The metal ligands and active site residues of extradiol dioxygenases are conserved, although several amino acid residues found exclusively in enzymes that preferentially cleave bicyclic substrates are missing in BphC_JF8. A three-dimensional homology model of BphC_JF8 provided a basis for understanding the substrate specificity, quaternary structure, and stability of the enzyme.The catabolic versatility exhibited by microorganism plays an essential role in the carbon cycle, and this depends to a large extent on the use of oxygenases. In the degradation of aromatic compounds, oxygenases play a significant role both by hydroxylating the aromatic ring and by catalyzing the ring fission reaction. Nearly all bacterial pathways for the degradation of aromatic compounds transform initial substrates into intermediates that carry two or more hydroxyl groups on the aromatic ring, which are then substrates for the ring cleavage dioxygenases. Cleavage is generally catalyzed by metalloenzymes of one of the two functional classes: intradiol dioxygenases, which cleave ortho to the hydroxyl substituents, or extradiol dioxygenases, which cleave meta to the hydroxyl substituents.Harayama and Rekik (1) proposed that extradiol dioxygenases could be divided into two families, those exhibiting a preference for bicyclic substrates and those with a preference for monocyclic substrates. Since then, several ex...