The average crystal structures of the ferroelectric and the intermediate paraelectric phases of SBN53 were refined at various temperatures up to 200 °C from single crystal X‐ray diffraction data. Shifts of the atoms reduce the microscopic spontaneous electric polarization which, however, does not entirely vanish on heating at the ferroelectric (FE) phase transition near 95 °C. Most atoms show an unusual temperature dependence of the atomic displacement parameters (adp). At the FE transition, a very large anisotropic increase of the U33 adp of part of the niobium atoms indicates enhanced structural disorder in the intermediate high temperature phase. A similarly high anisotropic U11 adp of the large Me2 site can be assigned to static disorder caused by incomplete occupation by Ba2+ and Sr2+ which is not affected by the FE phase transition.