2016
DOI: 10.3390/cryst6030031
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Theoretical Studies on Hydrogen Bonds in Anions Encapsulated by an Azamacrocyclic Receptor

Abstract: Hydrogen bonds in two halides encapsulated by an azamacrocyclic receptor were studied in detail by the density functional theory (DFT) approaches at B3LYP/6-311++G(d,p) and M06-2X/6-311++G(d,p) levels. The atoms in molecules (AIM) theory and the electron density difference maps were applied for characterizing the hydrogen bond patterns. The results suggest that the fluoride complex has a unique binding pattern which shows a hydrogen bond augmented with ionic bond characteristics.

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“…The rationalization of the mechanisms of growth of specific molecular networks is challenging and benefits from the fundamental insights and the validation of computational methods gained from the study of precursor macrocycle–anion clusters. The conformational landscape of these clusters can actually become quite complex, depending on the size of the macrocycle and on the degree of protonation of its amine groups (Boudon et al, 1991; Ilioudis and Steed, 2001; Warden et al, 2004a,b; Wichmann et al, 2006; Mateus et al, 2010; Wang et al, 2016). The aim of this work is to contribute to the understanding of the anionic supramolecular chemistry of azamacrocycles through the characterization of benchmark aggregates involving the binding of Cl − to protonated cyclen (tetraazacyclododecane).…”
Section: Introductionmentioning
confidence: 99%
“…The rationalization of the mechanisms of growth of specific molecular networks is challenging and benefits from the fundamental insights and the validation of computational methods gained from the study of precursor macrocycle–anion clusters. The conformational landscape of these clusters can actually become quite complex, depending on the size of the macrocycle and on the degree of protonation of its amine groups (Boudon et al, 1991; Ilioudis and Steed, 2001; Warden et al, 2004a,b; Wichmann et al, 2006; Mateus et al, 2010; Wang et al, 2016). The aim of this work is to contribute to the understanding of the anionic supramolecular chemistry of azamacrocycles through the characterization of benchmark aggregates involving the binding of Cl − to protonated cyclen (tetraazacyclododecane).…”
Section: Introductionmentioning
confidence: 99%