The yeast cell wall contains 1,3-glucanase-extractable and 1,3-glucanase-resistant mannoproteins. The 1,3-glucanase-extractable proteins are retained in the cell wall by attachment to a 1,6-glucan moiety, which in its turn is linked to 1,3-glucan (J. C. Kapteyn, R. C. Montijn, E. Vink, J. De La Cruz, A. Llobell, J. E. Douwes, H. Shimoi, P. N. Lipke, and F. M. Klis, Glycobiology 6:337-345, 1996). The 1,3-glucanase-resistant protein fraction could be largely released by exochitinase treatment and contained the same set of 1,6-glucosylated proteins, including Cwp1p, as the 1,3-glucanase-extractable fraction. Chitin was linked to the proteins in the 1,3-glucanase-resistant fraction through a 1,6-glucan moiety. In wild-type cell walls, the 1,3-glucanase-resistant protein fraction represented only 1 to 2% of the covalently linked cell wall proteins, whereas in cell walls of fks1 and gas1 deletion strains, which contain much less 1,3-glucan but more chitin, 1,3-glucanase-resistant proteins represented about 40% of the total. We propose that the increased crosslinking of cell wall proteins via 1,6-glucan to chitin represents a cell wall repair mechanism in yeast, which is activated in response to cell wall weakening.The cell wall is crucial for the integrity of Saccharomyces cerevisiae. Its rigid structure maintains the shape of the cell and offers protection against harmful environmental conditions (6, 19). The wall is mainly composed of -glucans and mannoproteins, in addition to smaller amounts of chitin and lipids (6). The glucans, which are interwoven with the chitin fibrils, form the inner skeletal layer of the cell wall, whereas the outer layer consists of mannoproteins. The majority of the cell wall mannoproteins are anchored into the wall through covalent linkages to heteropolymers of 1,6-and 1,3-glucan (18, 26, 41, 43) (Fig. 1). The 1,6-glucosyl moiety of these polymers is phosphodiester-linked to protein as shown by its sensitivity to treatment with ice-cold aqueous hydrofluoric acid (HF) and phosphodiesterases (18). This observation, together with data from other studies, pointed to a glycosylphosphatidylinositol (GPI)-derived structure as the attachment site for 1, 6-glucan (3, 23, 40, 42, 45). The 1,3/1,6-glucan heteropolymer was proposed to be identical to the alkali-soluble 1,3/1,6-glucan studied by Fleet and Manners (7,8). In S. cerevisiae, this alkali-soluble glucan becomes alkali insoluble through a linkage with chitin (11, 24) via a 1,4 bond from the terminal reducing residue of chitin to the nonreducing end of 1,3-glucan (20). Furthermore, by digesting cell walls with 1,3-glucanase, followed by incubation with exochitinase, a heterogeneous high-molecular-weight complex was isolated (21). Structural studies indicated that in this complex the terminal reducing residue of chitin is linked to 1,6-glucan (21). The nonreducing end of the 1,6-glucan polymer is bound to the GPI-derived glycan part of a cell wall protein, whereas its reducing terminus is linked to 1,3-glucan (...