P elements, a class of mobile genetic elements that cause hybrid dysgenesis in Drosophila melanogaster, have thus far been shown to occur only in this species. Using whole genome blot analysis, we present evidence which indicates that sequences homologous to D. melanogaster P elements also occur in Drosophila paulistprum, a distant relative. D. paulistorum is considered a species complex, consisting of six known incipient species or semispecies. All six semispecies possess P element homologous sequences. We further show that there is conservation of restriction enzyme recognition sites between the D. melanogaster and D. paulistorum P element sequences. The presence of P elements in these two species may clarify the roles of recent invasion and rapid loss in the temporal distribution of P elements in Drosophila.P elements are members of one of several classes of moderately repetitive, dispersed gene families in Drosophila melanogaster (1). They have recently become the subject of much interest because of their role in fostering a syndrome of correlated germ-line abnormalities known as P-M hybrid dysgenesis (2-4). The characteristic features of the syndrome include temperature-dependent sterility; illicit male recombination; and increased rates of mutation, chromosome aberrations, and non-disjunction. Dysgenesis occurs in the germ-line of progeny produced from certain interstrain crosses-that is, when males from a paternally contributing (P) strain are mated with females from a maternally contributing (M) strain (5-7). P strains possess at least several intact, genetically active P elements and manifest a P cytotype; M strains either completely lack or contain only structurally altered P elements and manifest an M cytotype (8-10). The P elements, which are stable in a P cytotype, transpose at high frequencies in an M cytotype, where they may be shown to be associated with both induced mutations and breakpoint hot spots for chromosome rearrangements (8,11,12). The intact P element is 2.9 kilobases (kb) long, contains open reading frames (which may encode transposase function), and has perfect terminal 31-base-pair inverted repeats (10). In addition to the highly conserved intact P elements, there are smaller elements heterogeneous in size, which presumably arise by internal deletions from the large elements (9, 10). At least some of the smaller elements are incapable of transposition unless a trans-acting activity is provided by intact elements (13). Experimental manipulation of P element transposition has been recently used to transform whole organisms (13,14).The population dynamics and evolutionary biology of P elements have been the subject of considerable experimentation and speculation. Three general observations have been made about the distribution and interactive dynamics of P and M types. First, P types were not found in strains collected from the wild before about 1950, while their frequency increases with decreasing time in laboratory cultivation (15). Second, there are distinct geographical pat...