By enabling earlier and more appropriate treatment, rapid molecular pathogen testing (RMPT) can greatly improve the management of acute infectious disorders, such as septicemia. Molecular testing for septicemia offers opportunities to generate substantial value but requires pathologists to expand and/or assume new roles, including:• Technological and administrative leadership of a complex, rapidly changing field • Physician education programs to translate science into clinical interventions • Integration of laboratory and clinical services • Value-based economic decision-making in a clinical environment.This paper explores the issues that call for new pathologist roles in molecular pathogen testing, reviews recent literature to assess the value of such testing in treating septicemia, and models potential cost savings for institutions of various sizes.Two recent U.S. studies of this testing included the impact on hospital costs. Both studies evaluated clinical participation and close collaboration by pharmacists and laboratory professionals in a coordinated septicemia management program. Comparison of patients evaluated with RMPT versus traditional culture-based testing found significant decreases in septicemia-related costs at two hospitals (30-43%, or approximately $20,000/patient in direct cost savings). Extrapolating this data to the typical 200-750-bed hospital indicates potential, annual net savings of $3-6 million per hospital.Clearly, institutions that implement RMPT for septicemia can generate substantial value, if pathologists expand and/ or assume new roles and responsibilities. Optimally mapping the analytic performance of complex molecular tests to clinical settings with variable types of resistant pathogens and disorders requires the expertise of physician pathologists.