The
chaperone–usher secretion pathway is a conserved bacterial
protein secretion system dedicated to the biogenesis of adhesive fibers.
Usher, a multidomain-containing outer membrane protein, plays a central
role in this process by acting as a molecular machine that recruits
different chaperone–subunit complexes, catalyzes subunit polymerization,
and forms a channel for secretion of the assembled subunits. While
recent crystal structural studies have greatly advanced our understanding
of the structure and function of ushers, the overall architecture
of the full-length apo-usher, the molecular events that dictate conformational
changes in usher during pilus biogenesis, and its activation by the
specific chaperone–adhesin complex remain largely elusive.
Using single-molecule fluorescence resonance energy transfer studies,
we found that the substrate-free usher FimD (apo-FimD) adopts a contracted
conformation that is distinct from its substrate-bound states; both
the N-terminal domain (NTD) and the C-terminal domain (CTD) of apo-FimD
are highly dynamic, and FimD coordinates its domain conformational
changes via intramolecular domain conformation signaling. By combining
these studies with in vitro photo-cross-linking studies,
we further show that only the chaperone-bound adhesin (FimC:FimH)
can be transferred to the CTD, dislocates the plug domain, and triggers
conformational changes in the remaining FimD domains. Taken together,
these studies delineate an overall architecture of the full-length
apo-FimD, provide detailed mechanic insight into the activation of
apo-FimD, and explain why FimD could adjust its conformational states
to perform multiple functions in each cycle of pilus subunit addition
and ensure that pilus assembly proceeds progressively in a cellular
energy-free environment.