Antibody microarray technology identified Nup88 (nucleoporin 88) as a highly up-regulated protein in response to osmotic stress in inner medullary collecting duct (IMCD3) cells. Changes in expression were verified by Western blot and quantitative PCR for protein and message expression. In mouse and human kidney, Nup88 expression was substantial in the papilla, whereas it was nearly absent in the cortex. Furthermore, the expression of Nup88 increased 410.4 ؎ 22% in the papilla of mice after 36 h of thirsting. Nup88 protein expression in IMCD3 cells was significantly up-regulated in the first 8 h following exposure to acute osmotic stress, indicating that Nup88 is an early response protein. To define the function of Nup88 in the osmotic stress response, the transcription factor associated with hypertonicity, tonicity enhancer-binding protein (TonEBP), was cloned upstream of the green fluorescent protein. Employing this construct, we demonstrate that silencing Nup88 in IMCD3 cells acutely stressed to hypertonic conditions reduces nuclear retention of TonEBP, resulting in a substantial blunting in transcription of important osmotic stress response target genes and reduced cell viability. Finally, we show that in IMCD3 cells, nuclear export of TonEBP under isotonic conditions involves CRM-1 but under hypertonic stress is CRM1-independent. Our data, therefore, suggest that Nup88 is up-regulated in response to hypertonic stress and acts to retain TonEBP in the nucleus, activating transcription of critical osmoprotective genes.The cells that inhabit the hypertonic environment of the inner medulla of the kidney possess a number of adaptative mechanisms that allow them to survive in this environment (1-5). The classical osmotic stress response involves the prompt transcription of several target genes by the tonicity enhancer-binding protein (TonEBP), 2 also known as NFAT5(6 -9). Under isotonic conditions (300 mosmol/kg H 2 O), TonEBP is mainly present in the cytosol with only minor localization in the nucleus. However, under hypertonic stress, TonEBP is translocated to the nucleus, where it enhances the transcription of genes that are important in the early osmotic stress response. These genes includes aldose reductase (AR) (10), the sodium-myoinositol transporter (10), the BGT1 (betaine/GABA transporter 1) (11), the taurine transporter (TauT) (12), and heat shock protein 70 (Hsp70) (13) among others. Expression of these target genes results in the accumulation of a number of compatible organic osmolytes (mainly sorbitol, myoinositol, betaine, and taurine) that allow the cell to compensate the extracellular osmotic gradient and, hence, adapt to hypertonic stress (see Refs. 3 and 6 -9 for excellent reviews). One of the main mechanisms involved in the regulation of TonEBP activity under hypertonic stress is nucleocytoplasmic trafficking (7, 9, 14, 15). Our laboratory has employed several proteomic approaches, including two-dimensional difference gel electrophoresis (16) and antibody microarray (17) technologies to evaluate ...