We have isolated a human cDNA that is expressed in the intermediate and late stages of T-cell differentiation. The cDNA encodes a highly hydrophobic protein, termed MAL, that lacks a hydrophobic leader peptide sequence and contains four potential transmembrane domains separated by short hydrophilic segments. The predicted configuration of the MAL protein resembles the structure of integral proteins that form pores or channels in the plasma membrane and that are believed to act as transporters of water-soluble molecules and ions across the lipid bilayer. The presence of MAL mRNA in a panel of T-cell Total cytoplasmic RNA from tissue culture cells was prepared by the Nonidet P-40 lysis method (6). Membranebound RNA was prepared by mechanical disruption of cells in hypotonic buffer and differential centrifugation (7). When frozen tissues were used, total RNA was isolated by homogenization in 4 M guanidinium thiocyanate, followed by ultracentrifugation through a 5.7 M CsCl cushion (8). Poly-(A)' RNA was isolated by oligo(dT)-cellulose chromatography (9). High molecular weight genomic DNA was prepared essentially as described by Maniatis et al. (10).The first strand of cDNA was synthesized by oligo(dT) priming using poly(A)+ RNA from MOLT-4 cells and avian myeloblastosis virus reverse transcriptase (Life Sciences, St. Petersburg, FL) in the presence of actinomycin D at 100 ng/ml. This cDNA was mixed with a 10-fold mass excess of poly(A)+ RNA from CCRF HSB-2 cells, boiled for 60 sec, and incubated at 680C in 0.5 M phosphate buffer, pH 6.8/5 mM EDTA/0. 1% NaDodSO4 to a Rot (initial concentration of RNA x time) value of 1500 (11). Unhybridized cDNA was separated from the cDNA RNA hybrids by chromatography on a hydroxyapatite column using 0.12 M phosphate buffer, pH 6.8/0.1% NaDodSO4 at 60°C. This single-stranded cDNA fraction was then used to construct libraries in the EcoRI site of pBR322 (10) and bacteriophage XgtlO (12). The second strand was synthesized by using RNase H, Escherichia coli DNA polymerase, and T4 DNA ligase (13). cDNA molecules >800 base pairs long were cloned in the unique EcoRI site of XgtlO. Subtracted [32P]cDNA probes were generated using a similar protocol except that the cDNA was labeled to specific activities of up to 109 cpm/,ug (11). Screening was carried out using 106 cpm per 137-mm filter under standard conditions (10).High molecular weight genomic DNA was digested with restriction endonucleases and blotted as described by Southern (14). For RNA blots, RNA was denatured in the presence of 50% (vol/vol) formamide and 2.2 M formaldehyde, subjected to electrophoresis on 1.2% agarose/formaldehyde gels, and blotted as described by Thomas (15). Final blot washing conditions were 0.1x SSC/0.1% NaDodSO4 at 500C. (lx SSC = 0.15 M NaCl/0.015 M sodium citrate, pH 7.0.)Restriction fragments from XMA5 and pMA34 inserts were subcloned into the M13mp8 vector and sequenced (16).The full-length cDNA insert from XMA5 was subcloned in the appropriate orientation in the EcoRI site of pSP65 (17). Trans...