The crystallographic structure of the family 3 polysaccharide lyase (PL-3) PelI from Erwinia chrysanthemi has been solved to 1.45 Å resolution. It consists of an N-terminal domain harboring a fibronectin type III fold linked to a catalytic domain displaying a parallel -helix topology. The N-terminal domain is located away from the active site and is not involved in the catalytic process. After secretion in planta, the two domains are separated by E. chrysanthemi proteases. This event turns on the hypersensitive response of the host. The structure of the single catalytic domain determined to 2.1 Å resolution shows that the domain separation unveils a "Velcro"-like motif of asparagines, which might be recognized by a plant receptor. The structure of PelI in complex with its substrate, a tetragalacturonate, has been solved to 2.3 Å resolution. The sugar binds from subsites ؊2 to ؉2 in one monomer of the asymmetric unit, although it lies on subsites ؊1 to ؉3 in the other. These two "Michaelis complexes" have never been observed simultaneously before and are consistent with the dual mode of bond cleavage in this substrate. The bound sugar adopts a mixed 2 1 and 3 1 helical conformation similar to that reported in inactive mutants from families PL-1 and PL-10. However, our study suggests that the catalytic base in PelI is not a conventional arginine but a lysine as proposed in family PL-9.Polysaccharide lyases (EC 4.2.2.x) are polysaccharide-degrading enzymes that cleave glycosidic bonds of C 5 uronic acid polymers. They play a central role in the recycling of plant material and are potent virulence factors of plant pathogenic bacteria and fungi. In contrast to the 111 sequence-derived families of glycoside hydrolases, polysaccharide lyases have been grouped into only 18 families in the CAZy data base (1). Five polysaccharide lyase families (PL-1, 2, 3, 9, and 10) 4 contain pectate lyases (EC 4.2.2.2 and EC 4.2.2.9). These enzymes cleave polymeric ␣-1,4-linked galacturonic acid (GalA) within the pectate component of the cell wall by -elimination mechanism, leaving an unsaturated C 4 -C 5 bond at the newly formed non-reducing end. The activity is maximal in the pH range 8.5-10.5 and is metal ion-dependent; Ca 2ϩ is the general cofactor except for the members of the family PL-2, which depend on Co 2ϩ , Mn 2ϩ , and Ni 2ϩ (2, 3). The divalent cation mediates enzyme-substrate interaction by binding between the protein and the sugar (4). Various pectate lyases prefer either polygalacturonic acid or partially methylated pectin as substrate (5, 6).Atomic structures have been determined for representatives of all polysaccharide lyase families: PL-1 (7-10), PL-2 (3), PL-3 (11), PL-9 (12), and PL-10 (13, 14). They reveal three topologies for the catalytic module: 1) a right-handed parallel -helix fold common with the families PL-1, PL-3, and PL-9, first observed for family 1 pectate lyase PelC from Erwinia chrysanthemi (7); 2) an (␣/␣) 7 toroid in family 2, recently described in pectate lyase YePL2A from Yersinia enterocoliti...