1991
DOI: 10.1007/bf00273603
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The sialidase gene from Clostridium septicum: cloning, sequencing, expression in Escherichia coli and identification of conserved sequences in sialidases and other proteins

Abstract: An oligonucleotide mixture corresponding to the codons for conserved and repeated amino acid sequences of bacterial sialidases (Roggentin et al. 1989) was used to clone a 4.3 kb PstI restriction fragment of Clostridium septicum DNA in Escherichia coli. The complete nucleotide sequence of the sialidase gene was determined from this fragment. The derived amino acid sequence corresponds to a protein of 110,000 Da. The ribosomal binding site and promoter-like consensus sequences were identified upstream from the p… Show more

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Cited by 65 publications
(33 citation statements)
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“…Comparison of the NanB sequence with that of NanA revealed negligible homology. However, comparison with other sequences deposited with GenBank indicated a limited degree of amino acid homology (30% identity over 169 residues) with the sialidase of Clostridium septicum (30). The region of greatest similarity (51% identity and 86% similarity over 51 residues) includes an R-I-P motif that is found in the active site of other bacterial neuraminidases (29).…”
Section: Resultsmentioning
confidence: 98%
“…Comparison of the NanB sequence with that of NanA revealed negligible homology. However, comparison with other sequences deposited with GenBank indicated a limited degree of amino acid homology (30% identity over 169 residues) with the sialidase of Clostridium septicum (30). The region of greatest similarity (51% identity and 86% similarity over 51 residues) includes an R-I-P motif that is found in the active site of other bacterial neuraminidases (29).…”
Section: Resultsmentioning
confidence: 98%
“…Viral neuraminidase inhibitors have been very useful in the prevention and treatment of influenza, targeting similar high-risk patient populations. The PA2794 neuraminidase shares many conserved elements and folds in the manner predicted for other microbial neuraminidases (19,55). A preliminary analysis of PA2794 crystal structure indicates that the enzyme shares the same sialic acid binding fold as does the influenza enzyme, but otherwise has little homology (L. Tong and Y.-S. Hsiao, unpublished observations).…”
Section: Discussionmentioning
confidence: 95%
“…The nanI gene (Locus CPE 0725) encodes a 694-amino acid protein known as the "large sialidase enzyme" (49). The nanJ gene (Locus CPE 0553) encodes a 1173-amino acid protein not yet characterized, which displays a 51% sequence similarity to the 111-kDa sialidase from Clostridium septicum (50). Sialidase activity is detectable in culture supernatants during exponential growth of C. perfringens, and in vivo it is detectable in the bloodstream of experimental animals or patients with gas gangrene in early stages of the disease (51,52).…”
Section: Discussionmentioning
confidence: 99%