Human fibrinogen 1 is homodimeric with respect to its ␥ chains ('␥ A -␥ A '), whereas fibrinogen 2 molecules each contain one ␥ A (␥ A 1-411V) and one ␥ chain, which differ by containing a unique C-terminal sequence from ␥408 to 427L that binds thrombin and factor XIII. We investigated the structural and functional features of these fibrins and made several observations. First, thrombin-treated fibrinogen 2 produced finer, more branched clot networks than did fibrin 1. These known differences in network structure were attributable to delayed release of fibrinopeptide (FP) A from fibrinogen 2 by thrombin, which in turn was likely caused by allosteric changes at the thrombin catalytic site induced by thrombin exosite 2 binding to the ␥ chains. Second, cross-linking of fibrin ␥ chains was virtually the same for both types of fibrin. Third, the acceleratory effect of fibrin on thrombin-mediated XIII activation was more prominent with fibrin 1 than with fibrin 2, and this was also attributable to allosteric changes at the catalytic site induced by thrombin binding to ␥ chains. Fourth, fibrinolysis of fibrin 2 was delayed compared with fibrin 1. Altogether, differences between the structure and function of fibrins 1 and 2 are attributable to the effects of thrombin binding to ␥ chains.
IntroductionFibrinogen is a multidomain disulfide-linked protein composed of symmetric halves, each consisting of 3 polypeptide chains termed A␣, B, and ␥. 1 Human fibrinogen can be separated by ion exchange chromatography into 2 major fractions, fibrinogen 1 (peak 1 fibrinogen) and fibrinogen 2 (peak 2 fibrinogen). 2,3 Plasma fibrinogen contains approximately 15% fibrinogen 2. Structurally, the 2 fibrinogens differ from each other with respect to the composition of their ␥ chains. Fibrinogen 1 contains 2 ␥ A chains, each composed of 411 amino acids, whereas heterodimeric fibrinogen 2 molecules each contain one ␥ A and one ␥Ј chain. 3,4 The variant ␥Ј chain is longer (427 residues) and has a more anionic, carboxyl terminal sequence than the ␥ A chain beyond position 408. 4 Alternative mRNA splicing at the exon 9-exon 10 boundaries gives rise to the variant ␥Ј chain. 5 Thrombin binds to fibrinogen at the substrate site through its exosite 1, 6-8 thereby mediating cleavage of fibrinopeptide A 9-12 and slower cleavage of fibrinopeptide B. 13,14 Fibrin assembly commences with the formation of double-stranded twisting fibrils in which fibrin molecules are arranged in a staggered, overlapping manner. 15 Subsequently, lateral fibril associations occur, resulting in thicker fibrils and fibers. Concomitant with converting fibrinogen to fibrin, thrombin activates factor XIII to factor XIIIa. [16][17][18][19][20][21] In the presence of factor XIIIa and Ca 2ϩ , fibrin undergoes intermolecular covalent cross-linking by the formation of ⑀-amino(␥-glutamyl) lysine isopeptide bonds. 22 Generally speaking, intermolecular cross-linking occurs rapidly between ␥ chains to form ␥-dimers and more slowly among ␣ chains to create oligomers and larger ␣ chain...