To obtain insight into the mechanism of precursor protein translocation across membranes, the effect of synthetic signal peptides and other relevant (po1y)peptides on in vitro PhoE translocation was studied. The PhoE signal peptide, associated with inner membrane vesicles, caused a concentration-dependent inhibition of PhoE translocation, as a result of a specific interaction with the membrane. Using a PhoE signal peptide analog and PhoE signal peptide fragments, it was demonstrated that the hydrophobic part of the peptide caused the inhibitory effect, while the basic amino terminus is most likely important for an optimal interaction with the membrane. A quantitative analysis of our data and the known preferential interaction of synthetic signal peptides with acidic phospholipids in model membranes strongly suggest the involvement of negatively charged phospholipids in the inhibitory interaction of the synthetic PhoE signal peptide with the inner membrane. The important role of acidic phospholipids in protein translocation was further confirmed by the observation that other (poly)peptides, known to have both a high affinity for acidic lipids and hydrophobic interactions with model membranes, also caused strong inhibition of PhoE translocation. The implication of these results with respect to the role of signal peptides in protein translocation is indicated Escherichia coli proteins destined for the periplasmic space or outer membrane are synthesized in the cytoplasm as precursor proteins with an N-terminal signal peptide. This signal peptide is essential for precursor protein translocation across the inner membrane (as reviewed in [l]). Furthermore, this translocation process is energy-dependent [2 -61 and requires in addition protein factors (as reviewed in [7]). The signal peptides do not show sequence homology, but they are characterized by a basic amino terminus, a hydrophobic core of 10 -15 amino acid residues and a C-terminal polar section [S]. In the eukaryotic secretion pathway the analogous signal peptides show molecular interactions with the signal recognition particle [9, lo], putative signal sequence receptors [ l l , 121 and signal peptidase [13]. In the prokaryotic system, apart from the leader peptidase [14], no protein components directly interacting with the signal peptide have yet been identified. The structure of the signal peptides seems to be very well suited for a direct interaction with the lipid component of the membrane. A negatively charged lipid-specific insertion of synthetic signal peptides has indeed been demonstrated in model membrane experiments [lS -171.Synthetic signal peptides have been used to gain insight into the mechanism of protein translocation. They are able to inhibit precursor protein translocation in vitro into microCorrespondence to T.