© F e r r a t a S t o r t i F o u n d a t i o nat B.R.C. St Vincent's Hospital, Australia. All experiments were performed under the ethical guidelines of the Lund University or St Vincent's Health Melbourne animal ethics committees. 0.1-5x10 5 unsorted transduced cells from C57Bl/6 mice (BalbC in Online Supplementary Figure S3) were injected intravenously (IV) with 1-2x10 5 fresh whole BM cells into lethally irradiated recipients (8-12 weeks old, tracked using CD45.1/CD45.2). Cells from multiple transductions (n>8 for MIG and SKI; n=3 for ARPG) were transplanted into 4-6 recipients/transduction. Recipients were sacrificed after 16 weeks and the equivalent of half a femur of BM was transplanted into secondary and tertiary recipients. One cohort of mice was kept for 18 months.
Cell preparations and flow cytometryPeripheral blood (PB), BM and spleen were analyzed on a Sysmex (Boule Medonice CA 530-16, or Sysmex KX-21N, Roche Diagnostics, Australia). FACS analysis was performed on a FACS Calibur or LSRFortessa, while cell sorting was performed on a FACS Diva or FACS Aria (BD, San Jose, CA, USA). Results were analyzed with FlowJo software, v.8.8.6 (Tree Star, Ashland, OR, USA).
Hematopoietic progenitor assaysTo analyze TGF-β sensitivity, 200 GFP+ cells/mL were seeded in methylcellulose (M3231, Stem Cell Technologies), supplemented with 50 ng/mL mSCF, 10 ng/mL mIL-3, and 10 ng/mL hIL-6, with or without 10 ng/mL TGF-β (all from PeproTech, Rocky Hill, NJ, USA) (n=2 transductions). Unsorted BM cells from 16 weeks post-transplantation were plated for colonies; 30,000 cells/mL as above for myeloid and 50,000 cells/mL for pre-B-cell colonies (M3630). For HGF-analysis 250 sorted GFP+ cells/mL were seeded in methylcellulose with 50 ng/mL mSCF, 10 ng/mL mIL-3, 50 ng/mL hIL6, and 3 U/mL rhEpo (Jansen-Cilag) together with 0, 100 nm or 300 nm of MET Inhibitor III (Calbiochem cat. n. 448105) (n=3 separate transductions). All colonies were scored on Day 7.
MorphologyPB smears and BM cytospins were stained with May Grünwald (Merck) and Giemsa (BDH). Megakaryocytes were scored in paraffin-embedded sections of decalcified tibiae stained with Mayer's hematoxylin and eosin (n=4 for MIG; n=5 for SKI). Images were taken using an S. Singbrant et al. 648 haematologica | 2014; 99(4)
© F e r r a t a S t o r t i F o u n d a t i o nOlympus BH2 microscope and a MagnaFire-SP Optronics Digital Camera.
Gene expression profilingQuantification of RNA was made on GFP+ BM cells using the Taq-Man™ System (Applied Biosystems, Foster City, CA, USA). For microarray, total RNA was extracted from GFP+ LKS cells using the RNeasy Micro kit (Qiagen), and hybridized to the Illumina Mouse WG-6 v.2.0 Expression BeadChip at the Ramaciotti Centre for Gene Function Analysis, University of NSW, Australia (n=6 independent transductions). For Illumina data analysis see the Online Supplementary Methods, differentially expressed genes in Online Supplementary Appendix File 1, enriched gene sets in Online Supplementary Appendix File 2, and raw and processed mi...