Inoculation of leaves of Arabidopsis thaliana (L.) Heynh. with the wheat pathogen, Pseudomonas syringae pv syringae, resulted in the expression of the hypersensitive reaction and in phytoalexin accumulation. No phytoalexin accumulation was detected after infiltration of leaves with a mutant of P. s. syringae deficient in the ability to elicit a hypersensitive reaction; with the crucifer pathogen, Xanthomonas campestris pv campestris; or with 10 milimolar potassium phosphate buffer (pH 6.9). Phytoalexin accumulation was correlated with the restricted in vivo growth of P. s. syringae. A phytoalexin was purified by a combination of reverse phase flash chromatography, thin layer chromatography, followed by reverse phase high performance liquid chromatography. The Arabidopsis phytoalexin was identified as 3-thiazol-2'-yl-indole on the basis of ultraviolet, infrared, mass spectral, 1H-nuclear magnetic resonance, and '3C-nuclear magnetic resonance data.Phytoalexins are low mol wt, antimicrobial compounds of plant origin that accumulate after inoculation with a plant pathogen (14). A number of observations support the hypothesis that phytoalexins play a role in the defense response of plants to pathogens. Phytoalexins are absent in healthy tissues and accumulate after infection by fungal (18,24,30) or bacterial (9, 1 1) pathogens in monocotyledonous plants (24) as well as in dicotyledonous plants (9,18,30). Phytoalexins have been demonstrated to accumulate rapidly at the site of attempted infection in sufficient quantities to inhibit the in vitro growth of fungi (18,30) and bacteria (9). Virulence of the fungus Nectria haematococca on pea is correlated with the ability to detoxify the phytoalexin pisatin (28). Furthermore, transformation of Cochliobolus heterostrophus with the gene encoding pisatin demethylase allowed this maize patho-