“…The majority of gene alterations implicated in our model, including PTPRT , EPHA3 , ERBB4 , ATRX , PTPRD , AMER1 , TERT , HGF , POLE , NTRK3 , EPHA5 , ALK , and PGR , were positively correlated with the high-score group and favorable ICI responses. For some of these genes, like PTPRT [ 37 , 38 ], PTPRD [ 38 ], ERBB4 [ 39 ], ATRX [ 40 ], TERT [ 41 ], POLE [ 8 ], NTRK3 [ 42 ], EPHA5 [ 43 ], and ALK [ 14 ], previous literature has highlighted their potential roles as biomarkers for ICIs therapy in NSCLC. Our study firstly reported the significance of EPHA3 , AMER1 , HGF , and PGR alterations.…”