Abstract:Amphibian declines are seen as an indicator of the onset of a sixth mass extinction of life on earth. Because of a combination of factors such as habitat destruction, emerging pathogens and pollutants, over 156 amphibian species have not been seen for several decades, and 34 of these were listed as extinct by 2004. Here we report the rediscovery of the Hula painted frog, the first amphibian to have been declared extinct. We provide evidence that not only has this species survived undetected in its type localit… Show more
“…Yet, several sites of close syntopy exist (Lanza et al, 1984(Lanza et al, , 1986Vences, Glaw and Hirschberger, 1996) and so far, no indication of hybridization has been published. In this case, the taxa concerned are phylogenetically distant (Lanza et al, 1984(Lanza et al, , 1986Fromhage, Vences and Veith, 2004;Pabijan et al, 2012;Biton et al, 2013), and differentiated both morphologically (Lanza et al, 1984;Clarke and Lanza, 1990;Capula and Corti, 1993;Clarke, 2007) and bioacoustically (Glaw and Vences, 1991). The other two cases are the contact zones which herein are characterized geographically in some detail.…”
Section: Discussionmentioning
confidence: 99%
“…The phylogeny and phylogeography of Discoglossus has been subject of numerous studies (Lanza et al, 1984(Lanza et al, , 1986García-Paris and Jockusch, 1999;Martínez-Solano, 2004;Real et al, 2005;Zangari, Cimmaruta and Nascetti, 2006;Velo-Antón et al, 2008;Pabijan et al, 2012;Biton et al, 2013). The available evidence strongly suggests D. montalentii being the sister taxon of all other species of Discoglossus, and a sister group relationship of D. g. galganoi and D. g. jeanneae.…”
Section: Introductionmentioning
confidence: 99%
“…Concatenated and species tree analyses of multigene DNA sequence data sets have provided concordant reconstructions of the evolutionary history of this genus (Pabijan et al, 2012;Biton et al, 2013), and we therefore refrained from phylogenetic analyses of our COB and RAG1 data set and instead opted for visualizing patterns of differentiation in the form of haplotype networks.…”
Section: Dna Sequence Analysismentioning
confidence: 99%
“…Among extant frogs, the sister taxon of Discoglossus is Latonia nigriventer (Mendelssohn and Steinitz, 1943) from Israel (Biton et al, 2013), and the Discoglossus-Latonia clade is sister to the midwife toads, Alytes Wagler, 1830 (Roelants and Bossuyt, 2005;Roelants et al, 2007;Biton et al, 2013). Discoglossus currently contains 5-6 extant species: D. montalentii Lanza, Nascetti, Capula and Bullini, 1984 D.…”
Abstract. Painted frogs (Discoglossus) contain five to six species of Western Palearctic anurans that are mainly distributed in allopatry. We here provide the first comprehensive assessment of the phylogeography of the Moroccan species D. scovazzi and geographically characterize its contact zone with D. pictus in Eastern Morocco. Discoglossus scovazzi shows, in general, a weak phylogeographic structure across Morocco on the basis of mitochondrial DNA sequences of the cytochrome b gene, with only populations centered in the Atlas Mountains characterized by the presence of slightly divergent haplotypes. In eastern Morocco, all populations east of the Moulouya River were clearly assignable to D. pictus. This species was also found along the Mediterranean coast west of the Moulouya, in the cities of Nador and Melilla, suggesting that not the river itself but the wide arid valley extending along much of the river (except close to the estuary) acts as a possible distributional barrier to these frogs. No sympatry of D. scovazzi with D. pictus was observed, and all specimens were concordantly assigned to either species by DNA sequences of cytochrome b and of the nuclear marker RAG1. Species distribution models of the two taxa show largely overlapping areas of suitable habitat, and the two species' niches are significantly more similar than would be expected given the underlying environmental differences between the regions in which they occur. Comparative data are also presented from the southern Iberian contact zone of D. galganoi galganoi and D. g. jeanneae. These taxa showed less clear-cut distributional borders, extensively shared RAG1 haplotypes, and had instances of sympatric occurrence on the basis of cytochrome b haplotypes, in agreement with the hypothesis of a yet incomplete speciation. In this wide contact zone area we found mitochondrial sequences containing double peaks in electropherograms, suggesting nuclear pseudogenes or (less likely) heteroplasmy, possibly related to the ongoing admixture among the lineages.
“…Yet, several sites of close syntopy exist (Lanza et al, 1984(Lanza et al, , 1986Vences, Glaw and Hirschberger, 1996) and so far, no indication of hybridization has been published. In this case, the taxa concerned are phylogenetically distant (Lanza et al, 1984(Lanza et al, , 1986Fromhage, Vences and Veith, 2004;Pabijan et al, 2012;Biton et al, 2013), and differentiated both morphologically (Lanza et al, 1984;Clarke and Lanza, 1990;Capula and Corti, 1993;Clarke, 2007) and bioacoustically (Glaw and Vences, 1991). The other two cases are the contact zones which herein are characterized geographically in some detail.…”
Section: Discussionmentioning
confidence: 99%
“…The phylogeny and phylogeography of Discoglossus has been subject of numerous studies (Lanza et al, 1984(Lanza et al, , 1986García-Paris and Jockusch, 1999;Martínez-Solano, 2004;Real et al, 2005;Zangari, Cimmaruta and Nascetti, 2006;Velo-Antón et al, 2008;Pabijan et al, 2012;Biton et al, 2013). The available evidence strongly suggests D. montalentii being the sister taxon of all other species of Discoglossus, and a sister group relationship of D. g. galganoi and D. g. jeanneae.…”
Section: Introductionmentioning
confidence: 99%
“…Concatenated and species tree analyses of multigene DNA sequence data sets have provided concordant reconstructions of the evolutionary history of this genus (Pabijan et al, 2012;Biton et al, 2013), and we therefore refrained from phylogenetic analyses of our COB and RAG1 data set and instead opted for visualizing patterns of differentiation in the form of haplotype networks.…”
Section: Dna Sequence Analysismentioning
confidence: 99%
“…Among extant frogs, the sister taxon of Discoglossus is Latonia nigriventer (Mendelssohn and Steinitz, 1943) from Israel (Biton et al, 2013), and the Discoglossus-Latonia clade is sister to the midwife toads, Alytes Wagler, 1830 (Roelants and Bossuyt, 2005;Roelants et al, 2007;Biton et al, 2013). Discoglossus currently contains 5-6 extant species: D. montalentii Lanza, Nascetti, Capula and Bullini, 1984 D.…”
Abstract. Painted frogs (Discoglossus) contain five to six species of Western Palearctic anurans that are mainly distributed in allopatry. We here provide the first comprehensive assessment of the phylogeography of the Moroccan species D. scovazzi and geographically characterize its contact zone with D. pictus in Eastern Morocco. Discoglossus scovazzi shows, in general, a weak phylogeographic structure across Morocco on the basis of mitochondrial DNA sequences of the cytochrome b gene, with only populations centered in the Atlas Mountains characterized by the presence of slightly divergent haplotypes. In eastern Morocco, all populations east of the Moulouya River were clearly assignable to D. pictus. This species was also found along the Mediterranean coast west of the Moulouya, in the cities of Nador and Melilla, suggesting that not the river itself but the wide arid valley extending along much of the river (except close to the estuary) acts as a possible distributional barrier to these frogs. No sympatry of D. scovazzi with D. pictus was observed, and all specimens were concordantly assigned to either species by DNA sequences of cytochrome b and of the nuclear marker RAG1. Species distribution models of the two taxa show largely overlapping areas of suitable habitat, and the two species' niches are significantly more similar than would be expected given the underlying environmental differences between the regions in which they occur. Comparative data are also presented from the southern Iberian contact zone of D. galganoi galganoi and D. g. jeanneae. These taxa showed less clear-cut distributional borders, extensively shared RAG1 haplotypes, and had instances of sympatric occurrence on the basis of cytochrome b haplotypes, in agreement with the hypothesis of a yet incomplete speciation. In this wide contact zone area we found mitochondrial sequences containing double peaks in electropherograms, suggesting nuclear pseudogenes or (less likely) heteroplasmy, possibly related to the ongoing admixture among the lineages.
“…We used two approaches for estimating time. First, we sourced large-scale timecalibrated phylogenetic trees for two major vertebrate groups, mammals (Bininda-Emonds et al, 2007) and birds (Jetz et al, 2012;Birdtree, 2016). Because the source data for the bird tree is composed of two posterior distributions generated from different avian taxonomies, we selected a random set of 100 trees from the distribution based on the Hackett et al (2008) taxonomy.…”
The environmental DNA (eDNA) approach has already been established as a valuable tool for the detection and monitoring of rare and elusive species. However, its application is not limited to assessing whether or not a species is present in a given area. In this study, we collected environmental data from 48 aquatic locations that had previously been investigated in an eDNA‐based study. We sought to determine the abiotic and biotic factors that could explain the presence or non‐detection of Hula painted frog DNA at those locations, in order to characterize this rare species’ little studied habitat requirements. We found that the detection probability of this species decreased substantially with increasing phosphorus loads as well as in the presence of the wetland plant Lythrum salicaria. By contrast, the detection probability increased markedly when Phragmites australis or Ludwigia stolonifera constituted part of the dominant aquatic vegetation. Our results expand the knowledge on this elusive frog species and contribute valuable information for future habitat restoration plans. They further show that eDNA data can also be used to characterize the putative habitats of species where such data are scarce or even totally lacking.
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