ObjectiveTo provide initial quantitative magnetic resonance (MR) super‐resolution‐based three‐dimensional volumetric reference data on the growth dynamics of the ganglionic eminence (GE) in relation to cortical (CV) and total fetal brain volumes (TBV).MethodsThis retrospective study investigated 120 fetuses (undergoing 127 MRI scans, mean gestational age 27.3 weeks, SD 4.8 weeks) without structural CNS anomalies or other confounding comorbidities. Super‐resolution reconstructions of 1.5 and 3 T T2‐weighted images were generated. In addition to semi‐automated segmentation of the TBV and the CV, manual segmentation of the ganglionic eminence was performed. CV, TBV, and GE were quantified and three‐dimensional reconstructions were generated to visualize the developmental dynamics of the GE.ResultsIn the observed gestational ages, the GE volumes ranged from 74.88 to 808.75 mm3 and a maximum was detected at 21 gestational weeks followed by a linear decrease (R2 = 0.559) throughout the second and trimester. A drastic reduction of GE relative to CV and TBV in the late second trimester was observed with an exponential reduction (R2 = 0.936 and 0.924, respectively). Three‐dimensional renderings visualized a continuous change in the shape and size of the GE throughout the second and third trimester.ConclusionsEven small compartments of the fetal brain, which are inaccessible by standardized two‐dimensional measurements, can be precisely determined by super‐resolution processed fetal MRI. The inverse growth dynamics of the GE compared to TBV and CV documents the transitory nature and physiological involution of this (patho‐)physiologically important brain structure. The normal development and involution of the ganglionic eminence is mandatory for normal cortical development. Pathological changes of this transient organ will precede impairment of cortical structures and thus may allow an earlier diagnosis thereof.This article is protected by copyright. All rights reserved.