Abstract:Drosophila trachea is a premier model to study tube morphogenesis. After the formation of continuous tubes, tube maturation follows. Tracheal tube maturation starts with an apical secretion pulse that deposits extracellular matrix components to form a chitin-based apical luminal matrix (aECM). This aECM is then cleared and followed by the maturation of taenidial folds. Finally, air fills the tubes. Meanwhile, the cellular junctions are maintained to ensure tube integrity. Previous research has identified sever… Show more
“…A final notable pattern that emerged from the RNA-seq analysis was the strong upregulation of multiple Osiris -family genes in in ivory Δ17kb wings during early pupal development, in terms of fold change, significance, overall read count magnitude, and overall number of Osiris genes (Table S10). This gene family is thought to encode transmembrane transporters, although Osiris genes have not been well characterized outside of tracheal function in Drosophila ( 20 ), and they have not previously been linked to butterfly wing pigmentation. This gene family may provide candidates for future functional assessment.…”
Long non-coding RNAs (lncRNAs) are transcribed elements increasingly recognized for their roles in regulating gene expression. Thus far, however, we have little understanding of how lncRNAs contribute to evolution and adaptation. Here we show that a conserved lncRNA, ivory, is an important color patterning gene in the buckeye butterfly Junonia coenia. ivory overlaps with cortex, a locus linked to multiple cases of crypsis and mimicry in Lepidoptera. Along with the Livraghi et. al companion paper, we argue that ivory, not cortex, is the color pattern gene of interest at this locus. In J. coenia a cluster of cis-regulatory elements (CREs) in the first intron of ivory are genetically associated with natural variation in seasonal color pattern plasticity, and targeted deletions of these CREs phenocopy seasonal phenotypes. Deletions of different ivory CREs produce other distinct phenotypes as well, including loss of melanic eyespot rings, and positive and negative changes in overall wing pigmentation. We show that the color pattern transcription factors Spineless, Bric-a-brac, and Ftz-f1 bind to the ivory promoter during wing pattern development, suggesting that they directly regulate ivory. This case study demonstrates how cis-regulation of a single non-coding RNA can exert diverse and nuanced effects on the evolution and development of color patterns, including modulating seasonally plastic color patterns.
“…A final notable pattern that emerged from the RNA-seq analysis was the strong upregulation of multiple Osiris -family genes in in ivory Δ17kb wings during early pupal development, in terms of fold change, significance, overall read count magnitude, and overall number of Osiris genes (Table S10). This gene family is thought to encode transmembrane transporters, although Osiris genes have not been well characterized outside of tracheal function in Drosophila ( 20 ), and they have not previously been linked to butterfly wing pigmentation. This gene family may provide candidates for future functional assessment.…”
Long non-coding RNAs (lncRNAs) are transcribed elements increasingly recognized for their roles in regulating gene expression. Thus far, however, we have little understanding of how lncRNAs contribute to evolution and adaptation. Here we show that a conserved lncRNA, ivory, is an important color patterning gene in the buckeye butterfly Junonia coenia. ivory overlaps with cortex, a locus linked to multiple cases of crypsis and mimicry in Lepidoptera. Along with the Livraghi et. al companion paper, we argue that ivory, not cortex, is the color pattern gene of interest at this locus. In J. coenia a cluster of cis-regulatory elements (CREs) in the first intron of ivory are genetically associated with natural variation in seasonal color pattern plasticity, and targeted deletions of these CREs phenocopy seasonal phenotypes. Deletions of different ivory CREs produce other distinct phenotypes as well, including loss of melanic eyespot rings, and positive and negative changes in overall wing pigmentation. We show that the color pattern transcription factors Spineless, Bric-a-brac, and Ftz-f1 bind to the ivory promoter during wing pattern development, suggesting that they directly regulate ivory. This case study demonstrates how cis-regulation of a single non-coding RNA can exert diverse and nuanced effects on the evolution and development of color patterns, including modulating seasonally plastic color patterns.
“…2019a; Scalzotto et al . 2022; Scholl et al . 2023), but no comprehensive mutagenesis of the Osiris gene has been performed before.…”
Section: Resultsmentioning
confidence: 99%
“…No defect in the cuticle pattern of mechanosensory organs and epidermis was observed, although expression of multiple Osi genes was detected. Genetic redundancy, reported for the tracheal function (Scholl et al . 2023), is a likely reason.…”
Section: Discussionmentioning
confidence: 99%
“…2018; Scholl et al . 2018, 2023; Scalzotto et al . 2022), no comprehensive analysis of the expression and genetic requirement for Osi family genes has been reported for Drosophila or other insects.…”
Nanostructures of pores and protrusions in the insect cuticle modify molecular permeability and surface wetting and help insects sense a variety of environmental cues. The cellular mechanism specifying cuticle nanostructures is poorly understood. Here, we show that insect-specificOsirisfamily genes are expressed in various cuticle-secreting cells in theDrosophilahead in the early stage of cuticle secretion and collectively cover nearly the entire surface of the head epidermis. We show that each sense organ cell with various cuticular nanostructures expresses a unique combination ofOsirisgenes.Osirisgene mutations caused various cuticle defects in the corneal nipples of the eye and pores of the chemosensory sensilla.Osirisgenes provide an entry point for investigating cuticle nanopatterning in insects.
Nanostructures of pores and protrusions in the insect cuticle modify molecular permeability and surface wetting, and help insects sense various environmental cues. However, the cellular mechanisms that modify cuticle nanostructures are poorly understood. Here, we elucidate how insect-specific Osiris family genes are expressed in various cuticle-secreting cells in the Drosophila head during the early stages of cuticle secretion and cover nearly the entire surface of the head epidermis. Furthermore, we demonstrate how each sense organ cell with various cuticular nanostructures expressed a unique combination of Osiris genes. Osiris gene mutations cause various cuticle defects in the corneal nipples and pores of the chemosensory sensilla. Thus, our study emphasizes on the importance of Osiris genes for elucidating cuticle nanopatterning in insects.
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