2020
DOI: 10.1038/s41598-020-64210-1
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The nano-structural inhomogeneity of dynamic hydrogen bond network of TIP4P/2005 water

Abstract: A method for studying the time dependence of the short-range molecular order of water has been proposed. In the present study, water is considered as a dynamic network between molecules at distances not exceeding 3.2 Å. The instantaneous configurations obtained with the molecular dynamics method have been sequentially analyzed. the mutual orientation of each molecule with its neighboring molecules has been studied and the interaction energy of each pair of neighbor molecules has been calculated. The majority o… Show more

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Cited by 16 publications
(7 citation statements)
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“…Unbound water appears as a homogeneous structure -Formation of different water-filled structures (Vogt et al 2000) a Pulsed field gradient NMR. (Belosludov et al 2020), but actually is a mixture of free, single water molecules and a large multitude of shortlived, "picoseconds" clusters of bound water containing up to 15-20 water molecules. Thus, observation of "bound" or "free" water will depend on the timeframe of observation.…”
Section: Relevance Of Bound Versus Free Water In Biofilmsmentioning
confidence: 99%
“…Unbound water appears as a homogeneous structure -Formation of different water-filled structures (Vogt et al 2000) a Pulsed field gradient NMR. (Belosludov et al 2020), but actually is a mixture of free, single water molecules and a large multitude of shortlived, "picoseconds" clusters of bound water containing up to 15-20 water molecules. Thus, observation of "bound" or "free" water will depend on the timeframe of observation.…”
Section: Relevance Of Bound Versus Free Water In Biofilmsmentioning
confidence: 99%
“…The variation of the neighbor O-O length in TBAC hydrate was also larger than that in the two bromide hydrates. According to reference [ 41 ], the distribution of the O-O length in solid ice is concentrated between 2.7 and 2.8 Å with a maximum at 2.76 Å, whereas the distribution in liquid water is much broader (2.5–3.2 Å) with a longer average distance (2.81 Å). Though the average O-O lengths in these bromide hydrates were closer to that in the solid ice, the observed peaks in the hydrates appeared around 200 cm −1 , which is a lower wavenumber than for ice.…”
Section: Resultsmentioning
confidence: 99%
“…The geometric criterion of hydrogen bond (H-bond) was chosen as in our works [16,17]: length dO-O < 3.2 Å, mutual orientation angle αOH-O ≤ 30°. Long-lived H-bonds are those that existed for more than 2 ns.…”
Section: Methodsmentioning
confidence: 99%