The molecular landscape of premature aging diseases defined by multilayer network exploration

Abstract

Premature Aging (PA) diseases are rare genetic disorders that mimic some aspects of physiological aging at an early age. Various causative genes of PA diseases have been identified in recent years, providing insights into some dysfunctional cellular functions. However, the identification of PA genes also revealed significant genetic heterogeneity and highlighted the gaps in our understanding of PA molecular mechanisms. Furthermore, many patients remain undiagnosed. Overall, the current lack of knowledge about PA diseases hinders the development of effective diagnosis and therapies and poses significant challenges to improving patient care.Here, we present a network-based approach to systematically unravel the cellular functions disrupted in PA diseases. Leveraging a novel community identification algorithm, we delved into a vast multilayer network of biological interactions to extract the communities of 67 PA diseases from their 132 associated genes. We found that these communities can be grouped into six distinct clusters, each reflecting specific cellular functions: DNA repair, cell cycle, transcription regulation, inflammation, cell communication, and vesicle-mediated transport. We propose that these clusters collectively represent the landscape of the molecular mechanisms that are perturbed in PA diseases, providing a framework for better understanding their pathogenesis. Intriguingly, most clusters also exhibited a significant enrichment in genes associated with physiological aging, suggesting a potential overlap between the molecular underpinnings of PA diseases and natural aging.