The localization of the N-and C-terminal regions of pigment-binding polypeptides of the bacterial photosynthetic apparatus of Rhodobacter sphaeroides was investigated by proteinase K treatment of chromatophore and spheroplast-derived vesicles and amino acid sequence determination. Under conditions of proteinase K treatment of chromatophores, which left the in vivo absorption spectrum and the membrane intact, 15 and 46 amino acyl residues from the N-terminal regions of the L and M subunits, respectively, of the reaction center polypeptides were removed. The N termini are therefore exposed on the cytoplasmic surface of the membrane. The C-terminal domain of the light-harvesting B800-850a and B870a polypeptides was found to be exposed on the periplasmic surface of the membrane. A total of 9 and 13 amino acyl residues were cleaved from the B800-850a and B870a polypeptides, respectively, when spheroplasts were treated with proteinase K. The N-terminal regions of the a polypeptides were not digested in either membrane preparation and were apparently protected from proteolytic attack. Seven N-terminal amino acyl residues of the B800-850,1 polypeptide were removed after the digestion of chromatophores. C-terminal residues were not removed after the digestion of chromatophores or spheroplasts. The C termini seem to be protected from protease attack by interaction with the membrane. Therefore, the N-terminal regions of the , polypeptides are exposed on the cytoplasmic membrane surface. The C termini of the B polypeptides are believed to point to the periplasmic space.The photosynthetic apparatus of Rhodobacter sphaeroides is located in an intracytoplasmic membrane system formed by invaginations of the cytoplasmic membrane (15). The major components of the photosynthetic apparatus are the light-harvesting (LH) or antenna pigment-protein complexes and the photochemical reaction center (RC), which are present as integral membrane particles (14). The absorption of light energy by LH complexes creates excited singlet states which migrate over the antennae downhill to the RC where they are trapped and converted into a membrane potential difference and a redox potential difference. This conversion drives a cyclic electron transport and the formation of a proton gradient across the membrane (16).The bacteriochlorophyll and carotenoid pigments are bound in stoichiometric ratios to the polypeptides of the three complexes: RC and the LH complexes B870 and B800-850, named according to their near-infrared absorption bands. In each LH complex, two different polypeptides bind noncovalently two or three bacteriochlorophyll and one or two carotenoid molecules. The axes of the pigment molecules have a strict orientation relative to the plane of the membrane (6, 18, 25). The pigment-binding polypeptides span the membrane once by a transmembrane a helix of hydrophobic amino acyl residues in LH complexes (5). The RC subunits M and L (RC-M and RC-L, respectively) span the membrane five times each (1,13,22,39). The N-and C-terminal domains of L...