Background and ObjectivesZhu-Tokita-Takenouchi-Kim (ZTTK) syndrome (OMIM 617140) is a recently identified neurodevelopmental disorder caused by heterozygous loss-of-function (LoF) variants inSON. Because the SON protein functions as an RNA-splicing regulator, it has been shown that some clinical features of ZTTK syndrome can be attributed to abnormal RNA splicing. Several neurologic features have been observed in patients with ZTTK syndrome, including seizure/epilepsy and other EEG abnormalities. However, a relationship betweenSONLoF in ZTTK syndrome and hemiplegic migraine remains unknown.MethodsWe identified a patient with a pathogenic variant inSONwho shows typical clinical features of ZTTK syndrome and experienced recurrent episodes of hemiplegic migraine. To define clinical features, brain MRI and EEG during and after episodes of hemiplegic migraine were characterized. To identify molecular mechanisms for this clinical presentation, we investigated the impact of small interfering RNA (siRNA)-mediatedSONknockdown on mRNA expression of theCACNA1A,ATP1A2,SCN1A, andPRRT2genes, known to be associated with hemiplegic migraine, by quantitative RT-PCR. Pre-mRNA splicing ofPRRT2onSONknockdown was further examined by RT-PCR using primers targeting specific exons.ResultsRecurrent episodes of hemiplegic migraine in our patient typically followed modest closed head injuries, and recurrent seizures occurred during the most severe of these episodes. Transient hemispheric cortical interstitial edema and asymmetric EEG slowing were identified during episodes. Our siRNA experiments revealed thatSONknockdown significantly reducesPRRT2mRNA levels in U87MG and SH-SY5Y cell lines, although a reduction inCACNA1A,ATP1A2, andSCN1AmRNA expression was not observed. We further identified thatSONknockdown leads to failure in intron 2 removal fromPRRT2pre-mRNA, resulting in a premature termination codon that blocks the generation of functionally intact full-length PRRT2.DiscussionThis report identifies recurrent hemiplegic migraine as a novel clinical manifestation of ZTTK syndrome, further characterizes this clinical feature, and provides evidence for downregulation ofPRRT2caused bySONLoF as a mechanism causing hemiplegic migraine. Examination of theSONgene may be indicated in individuals with recurrent hemiplegic migraine.