The GDSL lipase CpGLIP1 from Chimonanthus praecox improves drought and cold tolerance in Arabidopsis and poplar

Liu, Daofeng; Zhao, Xiaoyan; Liu, Yuhong; Tian, Mingyang; Zhao, Jiahui; Bai, Ningyu; Huang, Renwei; Li, Mingyang; Sui, Shunzhao

doi:10.1016/j.indcrop.2024.118636

Industrial Crops and Products

2024

DOI: 10.1016/j.indcrop.2024.118636

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The GDSL lipase CpGLIP1 from Chimonanthus praecox improves drought and cold tolerance in Arabidopsis and poplar

Daofeng Liu,

Xiaoyan Zhao,

Yuhong Liu

et al.

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2024

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The evolution, variation and expression patterns of the Annexin gene family in the maize pan-genome

Liu,

Zhang,

Zhao

et al. 2024

Preprint

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Annexins (Anns) are a family of evolutionarily conserved, calcium-dependent, phospholipid-binding proteins that play critical roles in plant growth, development, and stress responses. Utilizing the pan-genome of 26 high-quality maize genomes, we identified 12 Ann genes, comprising 9 core genes (present in all 26 lines) and 3 near-core genes (present in 24–25 lines). This highlights the limitations of studying ZmAnn genes based on a single reference genome. Evaluating the Ka/Ks values of Ann genes in 26 varieties revealed that ZmAnn10 was under positive selection in certain varieties, while the remaining genes had Ka/Ks values less than 1, indicating purifying selection. Phylogenetic analysis divided ZmAnn proteins into six groups, with group six containing only ZmAnn12. Structural variation in certain varieties altered the conserved domains, generating many atypical genes. Transcriptome analysis showed that different Ann members have distinct expression patterns in various tissues and under different abiotic and biotic stress treatments. Weighted gene co-expression network analysis of transcriptome data from various maize tissues under cold stress identified four Ann genes (ZmAnn2, ZmAnn6, ZmAnn7, ZmAnn9) involved in co-expression modules. Overall, this study utilized high-quality maize pangenomes to perform a bioinformatic analysis of ZmAnn genes, providing a foundation for further research on ZmAnn genes.

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The evolution, variation and expression patterns of the Annexin gene family in the maize pan-genome

Liu,

Zhang,

Zhao

et al. 2024

Preprint

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The GDSL lipase CpGLIP1 from Chimonanthus praecox improves drought and cold tolerance in Arabidopsis and poplar

Cited by 1 publication

References 68 publications

The evolution, variation and expression patterns of the Annexin gene family in the maize pan-genome

The evolution, variation and expression patterns of the Annexin gene family in the maize pan-genome

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