Proteins synthesized by the rough endoplasmic reticulum (RER) co-translationally cross the membrane through the pore of a ribosome-bound translocon (RBT) complex. Although this pore is also permeable to small molecules, it is generally thought that barriers to their permeation prevent the cyclical process of protein translation from affecting the permeability of the RER. We tested this hypothesis by culturing Chinese hamster ovary-S cells with inhibitors of protein translation that affect the occupancy of RBTs by nascent proteins and then permeabilizing the plasma membrane and measuring the permeability of the RER to a small molecule, 4-methyl-umbelliferyl-␣-D-glucopyranoside (4-M␣G). The premature or normal release of nascent proteins by puromycin or pactamycin, respectively, increased the permeability of the RER to 4-M␣G by 20-30%. In contrast, inhibition of elongation and the release of nascent proteins by cycloheximide did not increase the permeability, but it prevented the increase in permeability by pactamycin. We conclude that the permeability of the RER is coupled to protein translation by a simple gating mechanism whereby a nascent protein blocks the pore of a RBT during translation, but after release of the nascent protein the pore is permeable to small molecules as long as an empty ribosome remains bound to the translocon.In eukaryotes, secretory and most integral membrane proteins are synthesized by a translationally active 80 S ribosome composed of 60 S and 40 S subunits and bound to a translocon complex, a heteromeric assembly of proteins embedded in the membrane of the rough endoplasmic reticulum (RER) 1 (Fig. 1). Nascent proteins emerging from the exit tunnel of the 60 S subunit co-translationally cross the membrane of the RER by passing through a protein-conducting channel (PCC) in the translocon complex (1). The exit tunnel of the 60 S subunit and the pore of the PCC must be large enough to be permeated by a nascent protein chain, and this pathway is therefore large enough to be permeated by many other small molecules when a ribosome-bound translocon (RBT) is translationally inactive and empty, i.e. the pore is not occupied by a nascent protein.We previously demonstrated (2) that the permeability of RBTs to a small, polar molecule (4-methyl-umbelliferyl-␣-D-glucopyranoside (4-M␣G)) was increased after puromycin, a tRNA analog, prematurely terminated translation and released nascent protein chains from the PCC (path a, Fig 1). The increased permeability to 4-M␣G was consistent with a previous report that RBTs incorporated into planar bilayers and opened by puromycin are permeable to ions (3), and our results were also supported by a recent report that puromycin can release calcium from the RER (4). The permeation of empty RBTs is especially significant in the context of recent studies by Nicchitta and colleagues (5, 6), who reported that approximately two-thirds of the 60 S subunits remain bound to translocons after the normal completion of protein translation, thereby constituting a large pool ...