The F 420 H 2 dehydrogenase is part of the energy conserving electron transport system of the methanogenic archaeon Methanosarcina mazei Gö 1. Here it is shown that cofactor F 420 H 2 -dependent reduction of 2-hydroxyphenazine as catalyzed by the membrane-bound enzyme is coupled to proton translocation across the cytoplasmic membrane, exhibiting a stoichiometry of 0.9 H Methanosarcina mazei strain Gö1 is a strictly anaerobic methanogenic archaeon that converts a limited number of simple substrates (H 2 ϩ CO 2 , methanol, methylamines, and acetate) to methane. 2-methylthioethanesulfonate is the central intermediate in all methanogenic pathways and is reductively demethylated to methane catalyzed by the 2-methylthioethanesulfonate reductase. The two electrons required for the reduction are derived from 7-mercaptoheptanoylthreonine phosphate, resulting in the formation of a heterodisulfide (CoB-S-S-CoM) 1 of 2-mercaptoethanesulfonate (HS-CoM) and 7-mercaptoheptanoylthreonine phosphate (HS-CoB) (1). An energyconserving step in the metabolism of methanogens is the reduction of CoB-S-S-CoM with either molecular hydrogen or reduced coenzyme F 420 . In recent years, the membrane-bound electron transfer of M. mazei Gö1 has been analyzed in detail, resulting in the discovery of two proton translocating systems referred to as H 2 :heterodisulfide oxidoreductase and F 420 H 2 : heterodisulfide oxidoreductase, respectively (2).During growth on methylated substrates, part of the methyl groups of the substrates is oxidized to CO 2 , and reducing equivalents are transferred to F 420 . The reduced cofactor (F 420 H 2 ) is reoxidized by the above-mentioned membrane-bound electron transport system consisting of an F 420 H 2 dehydrogenase and a heterodisulfide reductase. The transfer of electrons between the enzymes is most likely mediated by methanophenazine, a hydrophobic cofactor that has been isolated from the cytoplasmic membrane of M. mazei Gö1. The overall process has been shown to be competent in driving proton translocation across the cytoplasmic membrane (3). The resulting electrochemical proton gradient is the driving force for ATP synthesis from ADP ϩ P i catalyzed by an A 1 A 0 -type ATP synthase (2, 4).The F 420 H 2 dehydrogenase with a molecular mass of 115 kDa has been purified from M. mazei Gö1 and contains iron-sulfur clusters and FAD (5). The isolated enzyme is very similar to the corresponding protein from Methanolobus tindarius (6) and is composed of five different subunits with molecular masses of 40, 37, 22, 20, and 17 kDa. A F 420 H 2 dehydrogenase has also been purified form the sulfate-reducing archaeon Archaeoglobus fulgidus (7).In this report the gene locus encoding the F 420 H 2 dehydrogenase on the M. mazei genome is described. Furthermore, it is shown that the corresponding enzyme is a novel proton pump ¶ To whom correspondence should be addressed. Fax: 49-551-393793; E-mail: udeppen@gwdg.de. 1 The abbreviations used are: CoB-S-S-CoM, heterodisulfide of HSCoM and HS-CoB; HS-CoM, 2-mercaptoethansulfona...