The structures of two major phosphoglycolipids from the thermophilic bacteria Thermus oshimai NTU-063, Thermus thermophilus NTU-077, Meiothermus ruber NTU-124, and Meiothermus taiwanensis NTU-220 were determined using spectroscopic and chemical analyses to be 29-O-(1,2-diacyl-sn-glycero-3-phospho) -39-O-(a-N-acetyl-glucosaminyl)-N-glyceroyl alkylamine [PGL1 (1)] and the novel structure (2) is the first phosphoglycolipid identified with a 2-acylalkyldio-1-Ophosphate moiety. The fatty acids of the phosphoglycolipids are mainly iso-C 15:0 , -C 16:0 , and -C 17:0 and anteiso-C 15:0 and -C 17:0 . The ratios of PGL2 (2) to PGL1 (1) are significantly altered when grown at different temperatures for three strains, T. thermophilus NTU-077, M. ruber NTU-124, and M. taiwanensis NTU-220, but not for T. oshimai NTU-063. Accordingly, the ratios of iso-to anteiso-branched fatty acids increase when grown at the higher temperature. Supplementary key words nuclear magnetic resonance spectroscopy . matrix-assisted laser desorption ionization mass spectroscopy . capillary electrophoresis-mass spectroscopy . tandem mass spectrometry . Thermus oshimai NTU-063 . Thermus thermophilus NTU-077 . Meiothermus ruber NTU-124 . Meiothermus taiwanensis NTU-220Bacteria have evolved interesting thermoadaptive mechanisms, including changes in their membranes (1). For example, when Escherichia coli, Thermus aquaticus, Candida species, thermophilic Bacillus species, and Staphylococcus aureus are grown at high temperatures, the proportion of branched-chain fatty acids increases and the proportions of monoenoic and heptanoic fatty acids decrease (2). Temperature affects both the chain length and the degree of saturation of fatty acid components in Synechococcus species (3, 4). Polar lipid fatty acids can be used as a biochemical marker because many of the lipids of thermophilic bacteria isolated from microbial mats in hot springs have unique diol, plasmalogen, monoether, and diether structures (5).Thermus and Meiothermus species are Gram-negative thermophilic rods isolated from thermal hot springs, industrial and domestic water traps, and hydrothermal vents with neutral to alkaline pH (6). In these species, polar lipids occupy a large proportion of the cellular membrane fractions and usually include a major phospholipid, a major glycolipid, and minor phospholipids and glycolipids (7,8). The glycolipids usually contain three hexoses, one N-hexosamine, and one glycerol (6, 9-13). The hydrophobic parts are predominantly iso-and anteiso-branched fatty acids; straight-chain fatty acids are minor components. The high proportion of glycolipids in the cell membranes could possibly contribute to the ability of the bacteria to grow at high temperatures, because the relative proportions of the major glycolipids increase concomitantly with the growth temperature (14, 15).Thermus and Meiothermus species have been reported to have phosphoglycolipids (16) Abbreviations: CE-MS, capillary electrophoresis-mass spectroscopy; DQF-COSY, double quantum filtered-c...