The effect of soft repulsive interactions on the diffusion of particles in quasi-one-dimensional channels: A hopping time approach

Abstract

Fluids confined to quasi-one-dimensional channels exhibit a dynamic crossover from single file diffusion to normal diffusion as the channel becomes wide enough for particles to hop past each other. In the crossover regime, where hopping events are rare, the diffusion coefficient in the long time limit can be related to a hopping time that measures the average time it takes a particle to escape the local cage formed by its neighbours. In this work, we show that a transition state theory that calculates the free energy barrier for two particles attempting to pass each other in the small system isobaric ensemble is able to quantitatively predict the hopping time in a system of two-dimensional soft repulsive discs [U (r ij ) = (σ/r ij ) α ] confined to a hard walled channel over a range of channel radii and degrees of particle softness measured in terms of 1/α. The free energy barrier exhibits a maximum at intermediate values of α that moves to smaller values of 1/α (harder particles) as the channel becomes narrower. However, the presence of the maximum is only observed in the hopping times for wide channels because the interaction potential dependence of the kinetic prefactor plays an increasingly important role for narrower channels. We also begin to explore how our transition state theory approach can be used to optimize and control dynamics in confined quasi-one-dimensional fluids.arXiv:1904.09304v1 [cond-mat.soft]

Coupled bond dynamics alters relaxation in polymers with multiple intrinsic dissociation rates

“…Entropic forces are balanced by repulsive forces deriving from steric interactions between neighboring nodes or polymer chains. For simplicity, repulsive forces are captured via a phenomenological inverse potential for soft particles 37 that yields a force-distance relation of:…”

“…Entropic forces are balanced by repulsive forces deriving from steric interactions between neighboring nodes or polymer chains. For simplicity, repulsive forces are captured via a phenomenological inverse potential for soft particles 37 that yields a force–distance relation of:where E is a parameter with units of energy that characterizes the extent of repulsion, γ = 2 is a scaling coefficient that modulates particle stiffness, d is the end-to-end separation vector between nodes, and l c = Nb is the cutoff distance beyond which steric interactions are impossible.…”