The IB family of proteins regulates NF-B-dependent transcription by inhibiting DNA binding and localizing these factors to the cell cytoplasm. IB␣ does this by shifting the balance between nuclear import of Rel proteins and their export from the nucleus. Here we show that, unlike IB␣, IB and IB⑀ appear to sequester p65 or c-Rel in the cytoplasm by inhibiting nuclear import. Furthermore, because IB does not undergo nucleocytoplasmic shuttling, it cannot remove nuclear proteins like IB␣ does. We conclude that the mechanism of action differs among IB family members.The NF-B 1 /Rel family of transcription factors plays a central role in immune and inflammatory responses (1). In most cell types these proteins are sequestered in the cell cytoplasm complexed to a family of inhibitory IB proteins (2, 3). Cellular activation results in IB degradation, which leaves the DNAbinding protein free to translocate to the nucleus and activate gene expression. Because of the widespread effects of NF-B activation, its localization in the cytoplasm must be strictly maintained. IB␣-deficient mice are a striking example of the importance of NF-B sequestration in the cytoplasm; these mice die of a wasting disease that has been attributed to tumor necrosis factor-␣ production (4, 5). Nuclear factor-B has also been detected in several diseased tissues, where it has been proposed to contribute to the pathology in part by inhibiting apoptosis (6, 7).The association of Rel with IB␣ has been proposed to hide the NLS of Rel proteins (8, 9), thereby precluding nuclear entry of the transcription factor. In addition to hiding the NLS, association with IB␣ also inhibits DNA binding by NF-B. Thus, association of NF-B with IB ensures that NF-B-dependent gene transcription occurs only when cells are stimulated appropriately.Recently, IB␣ has been shown to shuttle between the nucleus and the cytoplasm. Nuclear entry is mediated by a nonclassical NLS located in the second ankyrin repeat of IB␣ (10 -12), and nuclear export is determined by a CRM1-dependent nuclear export sequence located in the N-terminal domain preceding the first ankyrin domain (13-15). A second nuclear export sequence has been identified at the C terminus of IB␣, but its functional significance is unclear at present (16,17). The observation that cytoplasmic sequestration of p65⅐RelA also required nuclear export was unexpected and led to a reassessment of the existing sequestration model. We and others (13-15) have proposed that the cytoplasmic location of Rel proteins by IB␣ is a dynamic process that depends on the active export of Rel⅐IB␣ complexes out of the nucleus.In our earlier studies we also showed that IB and IB⑀, unlike IB␣, do not shuttle via the CRM1 pathway. Specifically, the subcellular distribution of GFP-IB or GFP-IB⑀ in yeast was not affected by a mutation in the CRM1 gene, and leptomycin B (LMB) treatment did not alter the location of these proteins in transiently transfected mammalian cells. In addition, we did not detect an association between CRM1 protein and...