c Viable Bordetella pertussis isolates are essential for surveillance purposes. We performed culture of 223 PCR-positive nasopharyngeal samples. B. pertussis was recovered from 45 (20.2%) of the samples. Growth was associated with a high bacterial load, as determined by PCR. Culture from PCR-positive samples is a feasible approach to recover B. pertussis isolates, and culture can be limited to samples with a high bacterial load.
Despite a continuous immunization program against pertussis (whooping cough) in Norway from 1952, the incidence of pertussis has increased in the past 2 decades (3). Mechanisms proposed as explanation for this include waning of immunity and vaccine-driven virulence evolution (7).Real-time PCR has become the method of choice for detection of Bordetella pertussis in nasopharyngeal (NP) samples, making culture redundant (9). However, isolation of B. pertussis is of importance for epidemiologic purposes. Bacterial evolution under vaccine-induced immune pressure can be studied by characterization of B. pertussis isolates (4), and culture is essential for antimicrobial susceptibility testing and for understanding the public health implications of changes in the molecular epidemiology of B. pertussis.Isolation of B. pertussis from NP swabs obtained for analysis by PCR is possible, and direct streaking onto charcoal agar plates in the diagnostic laboratory has been tried with success (Kees J. Heuvelman, personal communication). The aim of the present study was to obtain B. pertussis isolates from NP swabs at the reference laboratory for B. pertussis at the Norwegian Institute of Public Health (NIPH) with minimal extra labor imposed on the primary diagnostic laboratory; only samples that scored positive for B. pertussis by real-time PCR were forwarded to NIPH for plating and culture.Two medical microbiology laboratories participated in the study: Fürst Medical Laboratory, Oslo (Lab 1), and the Department of Microbiology, Vestfold Hospital Trust (Lab 2). NP samples were obtained using a nylon flocked swab and transported in 1 ml of modified liquid Amies transport medium (ESwab; Copan Diagnostics, Inc., Corona, CA). DNA was extracted directly from 200 l of transport medium using MagnaPure LC (Roche, Indianapolis, IN). In-house protocols for real-time PCR targeting insertion sequences (IS) were used-either IS481 alone (Lab 1) (2) or both IS481 and IS1001 (Lab 2) (6). Each laboratory used its own criteria to score a sample as positive. Among other criteria, Lab 1 scored samples with a threshold cycle (C T ) value of Ͻ36 as positive, and samples with a C T value of 36 to 40 were retested for reproducibility before scoring as positive. In Lab II, the total number of cycles was 35. The assays were not further compared for the purpose of the present study. Samples scored as positive in the IS481 assay between 18 November 2011 and 13 February 2012 at Lab 1 and between 7 January 2012 and 7 February 2012 at Lab 2 were consecutively included in the study. The samples were kept refrigerated at 4°C and forward...