Bienertia sinuspersici is a land plant known to perform C 4 photosynthesis through the location of dimorphic chloroplasts in separate cytoplasmic domains within a single photosynthetic cell. A protocol was developed with isolated protoplasts to obtain peripheral chloroplasts (P-CP), a central compartment (CC), and chloroplasts from the CC (C-CP) to study the subcellular localization of photosynthetic functions. Analyses of these preparations established intracellular compartmentation of processes to support a NAD-malic enzyme (ME)-type C 4 cycle. Western-blot analyses indicated that the CC has Rubisco from the C 3 cycle, the C 4 decarboxylase NAD-ME, a mitochondrial isoform of aspartate aminotransferase, and photorespiratory markers, while the C-CP and P-CP have high levels of Rubisco and pyruvate, Pidikinase, respectively. Other enzymes for supporting a NAD-ME cycle via an aspartate-alanine shuttle, carbonic anhydrase, phosophoenolpyruvate carboxylase, alanine, and an isoform of aspartate aminotransferase are localized in the cytosol. Functional characterization by photosynthetic oxygen evolution revealed that only the C-CP have a fully operational C 3 cycle, while both chloroplast types have the capacity to photoreduce 3-phosphoglycerate. The P-CP were enriched in a putative pyruvate transporter and showed light-dependent conversion of pyruvate to phosphoenolpyruvate. There is a larger investment in chloroplasts in the central domain than in the peripheral domain (6-fold more chloroplasts and 4-fold more chlorophyll). The implications of this uneven distribution for the energetics of the C 4 and C 3 cycles are discussed. The results indicate that peripheral and central compartment chloroplasts in the single-cell C 4 species B. sinuspersici function analogous to mesophyll and bundle sheath chloroplasts of Kranz-type C 4 species.Rubisco is the central CO 2 fixation enzyme in plants. It is a bifunctional enzyme, catalyzing the carboxylation as well as the oxygenation of ribulose-bisphosphate (RuBP) to 3-phosphoglycerate (3-PGA) and phosphoglycolate, respectively. While 3-PGA is subsequently utilized in the C 3 cycle to produce triose-phosphates, phosphoglycolate has no known metabolic use (Ogren, 1984) and needs to be detoxified by the plant. This process is known as photorespiration, which is not only energy consuming but also results in a net loss of previously fixed carbon and nitrogen. The rate of carboxylation versus oxygenation through Rubisco is directly related to the availability of CO 2 and the concentration of oxygen competing for the catalytic site of the enzyme. Since Rubisco is thought to have evolved under much higher levels of CO 2 than current atmospheric concentrations, it is believed that photorespiration was insignificant earlier in photosynthetic organisms. Under current atmospheric CO 2 levels, however, significant amounts (e.g. up to 25%) of previously fixed carbon may be lost through RuBP oxygenase activity under conditions that favor photorespiration, like high temperatures or water stres...