Estimates of the total number of species that inhabit the Earth have increased significantly since Linnaeus's initial catalog of 20,000 species. The best recent estimates suggest that there are Ϸ6 million species. More emphasis has been placed on counts of free-living species than on parasitic species. We rectify this by quantifying the numbers and proportion of parasitic species. We estimate that there are between 75,000 and 300,000 helminth species parasitizing the vertebrates. We have no credible way of estimating how many parasitic protozoa, fungi, bacteria, and viruses exist. We estimate that between 3% and 5% of parasitic helminths are threatened with extinction in the next 50 to 100 years. Because patterns of parasite diversity do not clearly map onto patterns of host diversity, we can make very little prediction about geographical patterns of threat to parasites. If the threats reflect those experienced by avian hosts, then we expect climate change to be a major threat to the relatively small proportion of parasite diversity that lives in the polar and temperate regions, whereas habitat destruction will be the major threat to tropical parasite diversity. Recent studies of food webs suggest that Ϸ75% of the links in food webs involve a parasitic species; these links are vital for regulation of host abundance and potentially for reducing the impact of toxic pollutants. This implies that parasite extinctions may have unforeseen costs that impact the health and abundance of a large number of free-living species.climate change ͉ habitat loss ͉ parasite biodiversity T he year 2008 marks the tercentenary of the birth of Linnaeus, the scientist who first provided a formal classification for biological diversity. In the initial edition of Systema Naturae (1), Linnaeus included a group of species-the Paradoxa-that confounded his classification or whose actual existence he questioned. Pelicans, for example, were placed in Paradoxa because Linnaeus thought they might reflect the over-fervent imaginations of New World explorers. Parasitic worms were also placed in Paradoxa because Linnaeus initially thought that they might be confused, or misplaced, earthworms. In later editions of Systema Naturae, Linnaeus revised his opinions about both pelicans and parasitic worms. We now know much about parasites but still rarely think of them as major components of biodiversity. One primary goal of this article is to revise this misconception and quantify the ubiquity of parasitism as a lifestyle. We then attempt to quantify how many parasite species are threatened with extinction.To quantify the abundance and potential loss rates of parasite biodiversity, we initially need to quantify these measures for their host species. For this we have briefly synthesized the work of May (2, 3), Stork (4), Purvis and Hector (5), and Erwin (6). We then restrict our tally of parasite diversity to parasitic helminths of the vertebrates: trematodes, cestodes, acanthocephalans, and the parasitic nematodes. This tally will synthesize and update a...