The complete chloroplast genome of <i>Zingiber striolatum</i> Diels (Zingiberaceae)

Here, the complete chloroplast genome sequence of Zingiber teres is described using MGI paired-end sequencing. The genome is 163,428 bp in length and contains a small single-copy region (SSC) of 15,782 bp, a large single-copy region (LSC) of 88,142 bp, and two inverted repeat (IR) regions of 29,752 bp. The overall GC content is 36.1%, and the GC content of the IR regions is 41.1%, which is higher than that of both the LSC region (33.8%) and SSC region (29.5%). The genome of Z. teres contains 133 complete genes, including 88 protein-coding genes (79 protein-coding gene species), 38 tRNA genes (28 tRNA species), and 8 rRNA genes (four rRNA species). Maximum likelihood phylogenetic analysis yielded a well-resolved tree of the genus Zingiber , and Z. teres and Zingiber mioga were sister species in this tree. The development of DNA barcodes could aid the identification of Zingiber species.

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“… 2023 ), Z. montanum (MW801386; Tian et al. 2023 ), Z. corallinum (MW801385; Tian et al. 2023 ), Z. spectabile (NC_020363; Tian et al.…”

Section: Resultsmentioning

confidence: 99%

“… 2023 ), Z. corallinum (MW801385; Tian et al. 2023 ), Z. spectabile (NC_020363; Tian et al. 2023 ), Z. zerumbet (MK262726; Li et al.…”

Section: Resultsmentioning

confidence: 99%

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The complete chloroplast genome sequence of Zingiber teres S. Q. Tong & Y. M. Xia (Zingiberaceae)

Wang

Tian

Wang

et al. 2023

Mitochondrial DNA Part B

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The complete chloroplast genome of Hedychium flavum Roxb., an ornamental, edible and medicinal plant

Li,

Xiao,

Zhang

2023

Mitochondrial DNA Part B

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Metabolic Profiling and Transcriptome Analysis Provide Insights into the Anthocyanin Types and Biosynthesis in Zingiber striolatum Diels Flower Buds in Three Planting Modes

Zhou,

Wang,

Zhao

et al. 2024

Agronomy

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The flower buds of Zingiber striolatum Diels are considered a special vegetable in China, and they are rich in anthocyanins. However, the detailed composition types and the molecular mechanism of anthocyanin biosynthesis in Z. striolatum flower buds are still unclear. In this study, targeted metabolites were used to analyze and identify the anthocyanin types of Z. striolatum in three planting modes: monoculture (CK), intercropping with maize (ZP), and intercropping with soybean (SP). A total of 48 anthocyanins were identified with significant differential accumulation in Z. striolatum flower buds. Among them, cyanidin-3-O-glucoside was the main composition type of anthocyanins. Furthermore, the composition types of blue anthocyanin were identified in flower buds. A total of 15 structure genes were obtained from the transcriptome database of Z. striolatum flower buds. The qRT-PCR results revealed that the expression levels of ZsC4H-1, ZsC4H-2, ZsCHS-2, ZsCHI, ZsF3H, ZsF3’H, ZsDFR, ZsF3’5’H-3, and ZsANS genes were the highest in the ZP model. This study showed that the ZP model contributes to anthocyanin synthesis and accumulation of Z. striolatum flower buds among the three planting modes of Z. striolatum. These findings provide valuable information for research on the planting model and anthocyanin biosynthesis in Z. striolatum flower buds.

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The complete chloroplast genome of Zingiber striolatum Diels (Zingiberaceae)

Cited by 3 publications

References 11 publications

The complete chloroplast genome sequence of Zingiber teres S. Q. Tong & Y. M. Xia (Zingiberaceae)

The complete chloroplast genome sequence of Zingiber teres S. Q. Tong & Y. M. Xia (Zingiberaceae)

The complete chloroplast genome of Hedychium flavum Roxb., an ornamental, edible and medicinal plant

Metabolic Profiling and Transcriptome Analysis Provide Insights into the Anthocyanin Types and Biosynthesis in Zingiber striolatum Diels Flower Buds in Three Planting Modes

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