The human a and fl interferon (IFN) gene family is even more complex than has been generally appreciated. Human interferons are classified as a (leukocyte), fl (fibroblast), and y (immune) mainly on serologic grounds (1). Several investigators (2-7) have cloned and characterized at least 8 distinct cross-hybridizing species of IFN-a cDNA and a set of up to 16 cross-hybridizing IFN-a genes and pseudogenes. These genes do not have introns (3,8), are localized to human chromosome 9 (9), and appear to correspond to mature polyadenylated mRNA of length -0.8-1.4 kilobases (kb). These are collectively referred to by us as IFN-as mRNA (I0, i I). We recently described a second heterodisperse set of translationally active IFN-a mRNA of length 1.6-3.5 kb (peak activity at 1.8 kb), designated IFN-aL, which code for interferons that are serologically of the a type, but that do not appear to cross-hybridize with as-specific DNA probes (10, 11). Several investigators have also described the molecular cloning and characterization of a single species of human IFN-fl cDNA ("/~1") (12) derived from poly(I), poly (C)-induced diploid human fibroblasts (I 3-19). Characterization of the human chromosomal DNA indicates that there exists a single gene corresponding to IFN-fll that does not have introns (20)(21)(22)(23)(24) and that can also be localized to human chromosome 9 (9). Nevertheless, earlier results of genetic experiments with somatic cell hybrids had indicated that human IFN-fl genes were located on human chromosomes 2, 5, and 9 and that the presence of any of these human chromosomes alone was sufficient for the expression of human IFN-fl in somatic cell hybrids (25-30). However, the results of these somatic cell hybrid experiments have been controversial. On the one hand, Slate and Ruddle (27, 28) obtained evidence for the involvement of chromosomes 2, 5, and 9 in IFN-fl production, while, on the other hand, Meager and his colleagues (29,30) concluded that chromosome 9 alone was involved in IFN-fl production. The latter investigators were unable to find evidence to implicate chromosomes 2 or 5, although low levels of human IFN production were observed in somatic cell hybrids lacking chromosome 9. Data presented in the present report indicate that the human IFN-fl system is quite complex and that the chromosomal localization controversy can be resolved.