FANCJ mutations are genetically linked to the Fanconi anemia complementation group J and predispose individuals to breast cancer. Understanding the role of FANCJ in DNA metabolism and how FANCJ dysfunction leads to tumorigenesis requires mechanistic studies of FANCJ helicase and its protein partners. In this work, we have examined the ability of FANCJ to unwind DNA molecules with specific base damage that can be mutagenic or lethal. FANCJ was inhibited by a single thymine glycol, but not 8-oxoguanine, in either the translocating or nontranslocating strands of the helicase substrate. In contrast, the human RecQ helicases (BLM, RECQ1, and WRN) display strand-specific inhibition of unwinding by the thymine glycol damage, whereas other DNA helicases (DinG, DnaB, and UvrD) are not significantly inhibited by thymine glycol in either strand. In the presence of replication protein A (RPA), but not Escherichia coli single-stranded DNA-binding protein, FANCJ efficiently unwound the DNA substrate harboring the thymine glycol damage in the nontranslocating strand; however, inhibition of FANCJ helicase activity by the translocating strand thymine glycol was not relieved. Strand-specific stimulation of human RECQ1 helicase activity was also observed, and RPA bound with high affinity to single-stranded DNA containing a single thymine glycol. Based on the biochemical studies, we propose a model for the specific functional interaction between RPA and FANCJ on the thymine glycol substrates. These studies are relevant to the roles of RPA, FANCJ, and other DNA helicases in the metabolism of damaged DNA that can interfere with basic cellular processes of DNA metabolism.
Fanconi anemia (FA)2 is an autosomal recessive disorder characterized by multiple congenital anomalies, progressive bone marrow failure, and high cancer risk (1-3). Cells from FA patients exhibit spontaneous chromosomal instability and hypersensitivity to agents that induce DNA interstrand crosslinks. Although the precise mechanistic details of the FA pathway of interstrand cross-link-repair are not well understood, progress has been made in the identification of the FA proteins that are required for the pathway (1-3). Among the 13 FA complementation groups from which all FA genes have been cloned, only a few of the FA proteins are predicted to have direct roles in DNA metabolism. One of the more recently identified FA proteins shown to be responsible for complementation of the FA complementation group J is FANCJ (4 -6). FANCJ was originally designated BACH1 (BRCA1-associated C-terminal helicase), which was discovered by Cantor et al. (7) as a protein that binds to the BRCT repeats of BRCA1. A genetic interaction between FANCJ and BRCA1 in double strand break repair was established (7), and FANCJ mutations were identified in early onset breast cancer (7-9), suggesting a tumor suppressor role of FANCJ.FANCJ was first shown to be a DNA-dependent ATPase that catalytically unwinds duplex DNA with a 5Ј to 3Ј directionality (10). Consistent with its directionality, FANCJ r...