The major light-harvesting chlorophyll-a/b complex in most higher plants contains three carotenoids, lutein, neoxanthin, and violaxanthin. How these pigments are assembled into the complex during its biogenesis is largely unknown. Here we show that neoxanthin but not lutein can dissociate from the fully assembled complex. Its equilibrium binding constant in a detergent system (0.1% n-dodecyl--D-maltoside) was determined to be > 10 6 M ؊1 . Neoxanthin insertion into light-harvesting chlorophyll-a/b complex prefolded from overexpressed apoprotein (Lhcb1*2 from Pisum sativum) in the presence of chlorophylls a, b, and lutein as the sole carotenoid is kinetically controlled by an activation energy barrier of ϳ120 kJ mol ؊1 . This is the first thermodynamic and kinetic description of a binding equilibrium between a non-covalently bound pigment of the photosynthetic apparatus and its protein complex. Dissociation of neoxanthin from the major light-harvesting chlorophyll-a/b complex upon temperature increase is discussed in terms of providing a readily available substrate pool for synthesizing abscisic acid as part of a heat and drought stress response.The photosynthetic apparatus in the thylakoid membrane of green plants contains light-harvesting complexes enhancing its capacity to absorb light quanta that are then converted into chemical potential by the reaction centers. The major light-harvesting complex of photosystem II, LHCIIb, 2 is assembled in its trimeric form, equipped with 14 chlorophylls and 4 xanthophylls per apoprotein (1, 2). The xanthophylls consist of two molecules of lutein (Lu), one neoxanthin (Nx), and one violaxanthin (Vx), bound to the sites L1/L2, N1, and V1, respectively. L1 and L2 are located close to the center of the complex, stabilizing a superhelix of protein helices I and III, whereas N1 and V1 are located more peripherally.The specificity of xanthophyll binding sites has been addressed both by analyzing xanthophyll biosynthetic mutants (see below) and by employing recombinant in vitro systems. In the latter approach, complexes were formed by having different carotenoids compete for the various binding sites. Lu and Nx were found to bind to the L1/L2 and N1 sites, respectively, with high specificity (3, 4). As long as Lu is provided for binding to L1/L2, the N1 site does not bind any of the all-trans carotenoids Lu or Vx. Zx was shown to be a strong competitor for Lu, whereas Vx competes to a lesser extent. Consistently, when Lu is omitted completely from the refolding experiment, both Zx and Vx support complex formation by binding to L1/L2, although this increasingly compromises the complex stability. Moreover, Zx and Vx in L1/L2 compromise the binding specificity of N1, prompting its partial occupation with Vx. Xanthophyll biosynthetic mutants of Arabidopsis thaliana revealed a flexible response of the aggregational state of LHCIIb as well as of pigmentation of particular binding sites: double mutants lacking epoxycarotenoids as well as Lu exhibit a complete loss of trimeric LHCIIb with...