Objective: The objective of this study was to investigate the regulating role of NFIC in odontoblastic differentiation of human stem cells from apical papilla (hSCAPs).Materials and methods: The expression of NFIC in young permanent tooth was observed by immunohistochemical (IHC) staining and its expression levels both in young and mature permanent teeth were detected by western blot. hSCAPs were transplanted into the dorsum of immunocompromised mice, and immunohistochemical analysis was performed after 8 weeks. Real-time polymerase chain reaction and western blot were used to explore the expression pattern of NFIC and other odontogenic related genes during in vitro hSCAPs osteogenic differentiation.Results: During molar root formation, NFIC expression was restricted within the odontoblasts and preodontoblasts of human molars. The expression of NFIC in apical papilla was at a very low level, and the amounts of NFIC protein in coronal pulp were more than that in root pulp in both young and mature permanent teeth. Odontoblast-like cells were positive to NFIC immunohistochemistry staining in dentin-pulp complexes formed after hSCAPs transplantation. NFIC expression was concomitant to dentin sialoprotein (DSP) at early stage of osteogenic differentiation of hSCAPs.Conclusion: Our results suggest that NFIC is involved in the regulation of hSCAPs differentiation into odontoblasts during root development of the young permanent teeth and could be used as an early marker of odontoblast differentiation.